Gene Dhaf_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3015 
Symbol 
ID7260026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3235618 
End bp3236295 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID643562935 
Productthymidylate kinase 
Protein accessionYP_002459474 
Protein GI219669039 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000000103668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAC TCATTATTAT TGAAGGTGGA GATGGGAGCG GCAAGGCGAC CCAGACCCGG 
AAGCTATGGC GGCGCCTCGC AGATGAAGGG CTGCAAGTAA AAAAAGTGGA GTTCCCCAAT 
TATTCCAGTC CCTCCTCATC TCTGGTCACC ATGTATTTGG GAGGAGAGTT CGGCACGGAC 
CCTAATGGGG TAAATCCTTA TACAGCATCT ACGTTCTATG CTGTGGATCG CTATGCTTCT 
TACAAAACCC TCTGGGGGGA TTTTTACAGC CGGGGGGGGA TCATTCTCTC TGATCGATAT 
ACCACCTCTA ATATGATCCA CCAAGCTGTT AAAATCAAAG ACCCCGCCGG CTGGGCAAGC 
TATCTTGATT GGCTGAAAGA TTTCGAATAT CGCTTAATGG GTCTGCCTGA ACCGGACCTG 
GTTATTTATC TTAATATGCC CCCTGACCTG AGTATCCAGT TTATTGCCGG CCGTGCCGAC 
AAATCCTCGG TTACCAGTCA GGACATTCAT GAGAAAAATA AGGGTTATCT TAAGGAGTCT 
TATGACAATG CCCAAAAAGT CCGGGTGCGG GAAAACTGGC TGACCATAGA TTGTGTATCT 
GAAGGCAGGC TGAAGTCTAT TGAGGAAATA CACGAGGAAA TCTATGCAGT CACCCAAAAG 
GCCATAGTGT TAAAGTAA
 
Protein sequence
MGKLIIIEGG DGSGKATQTR KLWRRLADEG LQVKKVEFPN YSSPSSSLVT MYLGGEFGTD 
PNGVNPYTAS TFYAVDRYAS YKTLWGDFYS RGGIILSDRY TTSNMIHQAV KIKDPAGWAS 
YLDWLKDFEY RLMGLPEPDL VIYLNMPPDL SIQFIAGRAD KSSVTSQDIH EKNKGYLKES 
YDNAQKVRVR ENWLTIDCVS EGRLKSIEEI HEEIYAVTQK AIVLK