Gene Dhaf_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3005 
Symbol 
ID7260015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3226026 
End bp3227156 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content45% 
IMG OID643562924 
Producthypothetical protein 
Protein accessionYP_002459464 
Protein GI219669029 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02877] sporulation protein YhbH 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG ATATTATTGT CAGCCGGGAG GATTGGGGCT TACATCGCAA AGGCTATCTG 
GATCAAAACC GGCACAAAGA GAAAGTTCAG GAAGCGATCA AAAAGCAGCT TGGGGATTTA 
ATCGTTGATG AAAGCATCAT CCTCAGTGAT GGCAAAAAGG CTACCAAAAT ACCGATGCGC 
TCCTTAGAAG AGTTTCGCTT TCGTTTTGAT TACAACAAGA AAAAGCACAC AGGCCAAGGA 
AGCAAAAGAA TGCAGGATGG CGATATCCTG GCTCGGGAAA GCCAGCGCAA ACAAGGGGCC 
GGTAAAGGTC CGGGTGCCGG AGATGAGCCG GGAGTCGATA TTTATGAGGC TGAAGTCACT 
TATGAGGATC TGGCTACACT TCTTTTTGAG GAATTGCAGC TTCCTAATTT GGATGATAAA 
AAACGCCCCT TGATTGCTCA TGATAAACCG GAATTTAAAG ATATTCGCAA GAAAGGCCTG 
ATGGCCAATA TTGATAAAAA ACGCACTCTT ATCGAAAGCA TCAAACGGCA GGCCTTGGCC 
GGCAAGGATC AAGACCTCAA AATACTTCCT GAGGATTTGC GCTTTAAGAC CTGGGAAACT 
CATCCTAACT ATGAAACCAA TGCCGTTATC CTGGCTATGA TGGATACCTC AGGGTCCATG 
GGTCAGTTTG AAAAGTATAT ATCACGAACC TTCTTTTTCT GGATGGTGCG TTTCTTAAGG 
GAAAAGTATG AAAATGTGGA AATGCGCTTT TTGGCCCATC ACACTGAAGC GAAAGAAGTC 
ACGGAAGAGG AGTTTTTTAC CCGGGGAGAA AGCGGTGGAA CTCGTTGTTC CTCCGTCTAT 
CAACTGGCTT TAGAAATTAT CCGGCGGGAT TATCCTCCTG CCCACTATAA TATTTATCCG 
GTTCATTTTA CTGATGGCGA TAATATTGGC TCAGACAACA CCCGGTCCTT GAATCTGATG 
CAAAAGCTTG TGGACGTGAG TCAGGTAGTT GGCTATGGCG AGATTCTCAG AACCCACTAC 
TCCAGCACCC TCATGTCCTC TCTAAAGCGT ATTACGGATC CTAAGCTCCG CTTTGTCACG 
ATTCGCGATC GCCAAGAAGT TTATGAAGCG CTGAAAACGG TATTTTCTTA G
 
Protein sequence
MSDDIIVSRE DWGLHRKGYL DQNRHKEKVQ EAIKKQLGDL IVDESIILSD GKKATKIPMR 
SLEEFRFRFD YNKKKHTGQG SKRMQDGDIL ARESQRKQGA GKGPGAGDEP GVDIYEAEVT 
YEDLATLLFE ELQLPNLDDK KRPLIAHDKP EFKDIRKKGL MANIDKKRTL IESIKRQALA 
GKDQDLKILP EDLRFKTWET HPNYETNAVI LAMMDTSGSM GQFEKYISRT FFFWMVRFLR 
EKYENVEMRF LAHHTEAKEV TEEEFFTRGE SGGTRCSSVY QLALEIIRRD YPPAHYNIYP 
VHFTDGDNIG SDNTRSLNLM QKLVDVSQVV GYGEILRTHY SSTLMSSLKR ITDPKLRFVT 
IRDRQEVYEA LKTVFS