Gene Dhaf_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2895 
Symbol 
ID7259903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3103220 
End bp3104569 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content51% 
IMG OID643562813 
ProductD-serine dehydratase 
Protein accessionYP_002459354 
Protein GI219668919 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3048] D-serine dehydratase 
TIGRFAM ID[TIGR02035] D-serine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGC GAGACATGAC AGGGAAAAGC CCTGAGGTTA TACCCCATAC CCCCGTGGTG 
CAGGATTTGA GAGCAGCCCG GGAAATTTTC TGGATTAATC CTCATTATCG GGCAACTAAG
GAATTCAAGG AGGCCCAATT CGGAATCAGT CTCTCCGATA TTCACGATGC AGAAGAACGA
TTGCGGCGTT TTGCTCCTTA CCTGGCTAAA GCCTTCCCGG AGACACAACC GGCTCAAGGT
CTCATCGAGT CCCCTATTGT CCCTATAAAA AGGATGCAGA GCTATTTGGA ATCCCGTTAT
GGCGTTCAGA TACCCGGAGA TATCTGGCTG AAATGCGATC ATCAGCTGCC GATTTCCGGC
TCTATCAAGG CGCGGGGTGG GATTTATGAA GTTCTCAAAC ATGCCGAAGA AACTCTTATT
AAACAGGGCC TATTGACCAG GGAAGACGAT TATGCCAGGT TAAAGGATTC TTCGTTCAGA
GATGTTTTGT CTCATTATAA AATTGCTGTG GGTTCCACAG GAAATCTCGG GTTGAGCATC
GGCGTGATGG GAGCTGAATT GGGCTTTAAA GTCACTGTCC ATATGTCTGC CGATGCCAAA
GGGTGGAAAA AAGCACTTTT GCGCTCCAAG GGAGTGGAGG TGATTGAATA CACCTCCGAC
TATAGTAAGG CTGTGGAAGA AGGCCGCAGG CAGGCTGAAG GTGATTCCCG CTGTCACTTT
ATTGACGATG AAAATTCCCG GGATCTGTTT TTAGGCTATG CTGTAGCAGG ACTGAGGCTT
AAGGAGCAAT TAGAAAAATT GAACCGCAAG GTTGATGCCG ACCACCCTCT TTTTGTTTAC
CTGCCCTGTG GGGTGGGAGG GGGACCGGGG GGAGTGACCT TTGGCTTAAA GCAGGTGTTC
CAGGAGCATG TTCATTGTTT CTTTGCCGAG CCGACTCATT CTCCCTGTAT GGTGTTGGGA
TTAGCGACAG GGCTTCATGA TGGCATCGCT GTTCAGGATA TTGGGCTGGA TAACAAGACC
GAAGCCGATG GGTTGGCCGT AGGCAGAGCT TCCCGCTTCG TAGGCAAGAT CATGGCAGGC
TTGCTGAGCG GGGCCTTCAC CGTGGAGGAT GCAGAACTTT TCCGCTTGCT GCAGGCTCTT
GATCATGCAG AGGGGATACA ATGCGAGCCT TCGGCTTTGG CAGGAATGGC CGGTCCGGCC
CGGCTCCTGC TGTGTAAGGA AGGCCTTCAA TATATCAGGG AGCACCGGCT TGAAGAGGGA
TTGAAAAAGG GAACCCATCT GATTTGGGCG ACCGGCGGCA GTCTCGTCCC TGAGGAAGTG
ATGAAGGACT ATCTGTCACG AGGAAAATAG
 
Protein sequence
MNKRDMTGKS PEVIPHTPVV QDLRAAREIF WINPHYRATK EFKEAQFGIS LSDIHDAEER 
LRRFAPYLAK AFPETQPAQG LIESPIVPIK RMQSYLESRY GVQIPGDIWL KCDHQLPISG
SIKARGGIYE VLKHAEETLI KQGLLTREDD YARLKDSSFR DVLSHYKIAV GSTGNLGLSI
GVMGAELGFK VTVHMSADAK GWKKALLRSK GVEVIEYTSD YSKAVEEGRR QAEGDSRCHF
IDDENSRDLF LGYAVAGLRL KEQLEKLNRK VDADHPLFVY LPCGVGGGPG GVTFGLKQVF
QEHVHCFFAE PTHSPCMVLG LATGLHDGIA VQDIGLDNKT EADGLAVGRA SRFVGKIMAG
LLSGAFTVED AELFRLLQAL DHAEGIQCEP SALAGMAGPA RLLLCKEGLQ YIREHRLEEG
LKKGTHLIWA TGGSLVPEEV MKDYLSRGK