Gene Dhaf_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2554 
Symbol 
ID7259525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2758593 
End bp2759231 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID643562439 
ProductABC transporter related 
Protein accessionYP_002459017 
Protein GI219668582 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0272018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTACCA TGCTTGAAGT GAAAGACGTG AGTTTTCGTT ACGCAAACGG ACCTTGGGTT 
CTCCATAATG TGAACCTGAA GATCGAGGAT GGCGAAAGGG TAGCCTTAGT TGGGCCCAGC
GGCTATGGAA AAAGCACCTT GGCCAAAATT ATGGCCGGTT TTCTTAGACC GGAAAAAGGA
ACTGTTCTTC TGGATGGGAA GCCTTTGCCC AAAGGTGAGT ACTGCCCCGT GCAACTGGTT
TATCAGCATC CGGAAAAAGC ACTGAATCCC CGCTGGAAAA TGAAGTATTC CTTGAAAGAA
GCCGGCGTAC TGGATCCGGA GATTATGAAC GAAATGGGCA TCCGGGAAAT GTGGCTGGAG
CGTTGGCCCA ATGAACTTTC CGGCGGTGAA CTGCAGCGGT TTTGCGTAGT AAGGGCTTTA
GGAGAGCAGA CCCGCTTTTT AATCGCTGAT GAAATGACCA CCATGTTGGA TGCCGTGAAT
CAGGCTCATA TCTGGAAATT CCTGCTGCGG CACGCAGATA AAAAGAAGTT AGGGATCATT
TTGATTACCC ATAATATGTA TTTAGCGGAG CAGGTGGCAT CTCGGATTAT TGATGTTCCT
TCAATCAATA AAATCAGCGT AAGAACGGAA GATTTATGA
 
Protein sequence
MATMLEVKDV SFRYANGPWV LHNVNLKIED GERVALVGPS GYGKSTLAKI MAGFLRPEKG 
TVLLDGKPLP KGEYCPVQLV YQHPEKALNP RWKMKYSLKE AGVLDPEIMN EMGIREMWLE
RWPNELSGGE LQRFCVVRAL GEQTRFLIAD EMTTMLDAVN QAHIWKFLLR HADKKKLGII
LITHNMYLAE QVASRIIDVP SINKISVRTE DL