Gene Dhaf_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2456 
Symbol 
ID7259427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2652276 
End bp2652911 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content42% 
IMG OID643562342 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458920 
Protein GI219668485 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0797268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAA CCTTCGAGAA GCTGCCGGAC GGTAAAAAGG AGCAAATTAT CCAGGTTTGT 
ATCGAAGAAT TTATTGAAAA CGGCTATCAA AACGCTTCCA CCAATACCAT TGTCAAACGG 
CTGGGAATTT CCAAAGGCGT ATTGTTCCTT TACTTTAAAA ATAAAAAGAA TCTCTATCTT 
TATCTTGTCG AGTATATCAT GGAGTTTTTT ATACAGGATT ATTTTGAGGA ATACGCGGGC 
GGCCCGGTTA TCAATATCAA TGTCTTCGAT AATCTGGGTG AGTACTATAA AGAATTGATG 
CAGAAAAAAC CAGAGCTCTT TTTATTTATG CTGCAGGCCT TTGTCAATAC GCCGGCGGAG 
CTCAAAGAAG AGATCGACGC CAGGCATAAC CAGGCTCACG ACAGTCTGTT CCGGCATATG 
AACAACGAGG GTTTCCGGCC GGGCATCGAT ATTCACTTGG TGGACGATCT GCTGCATATG 
GTTTCCTATT ATGTGGGCCA GTTAATCACC AATGATTTGA AGGGCAAGGA TCTGAACACC 
ATCATCAAGG ATGAGATCAA TAAGAATATC GTACGCTATG CCGAGCTGTT TGCGAAGTAT 
GTGGATATCC TGAAGTATGG AGTCTATGAA AGATAG
 
Protein sequence
MYETFEKLPD GKKEQIIQVC IEEFIENGYQ NASTNTIVKR LGISKGVLFL YFKNKKNLYL 
YLVEYIMEFF IQDYFEEYAG GPVININVFD NLGEYYKELM QKKPELFLFM LQAFVNTPAE 
LKEEIDARHN QAHDSLFRHM NNEGFRPGID IHLVDDLLHM VSYYVGQLIT NDLKGKDLNT 
IIKDEINKNI VRYAELFAKY VDILKYGVYE R