Gene Dhaf_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2319 
Symbol 
ID7259288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2506835 
End bp2507965 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content49% 
IMG OID643562206 
ProductExcinuclease ABC C subunit domain protein 
Protein accessionYP_002458786 
Protein GI219668351 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA AGAACTGCTT AAAAGAGAAA TTAAAGGATC TGCCGGAGCA GCCGGGAGTT 
TATTTAATGC AGGATTCCTT GGGGAATATT ATCTATGTGG GCAAAGCCAA GAACCTCAAG 
AACCGGGTCT CCCAATATTT TTATAAGCAA AAGGACCGGG ACCCTAAAGT GGAGGAAATG 
ATCCTGCGTA TTGCGGATTG GGAGTACCGG ATAGTGGATA CAGAGCTGGA TGCCCTCCTG 
GAAGAGTGCC GCCTGATTAA GGAAATCAAG CCTCATTACA ACAGGCAGAT GAAAAATCAT 
CAGAAGTATG TCTACATCAA GATACCTGAT GAAAGCTTTC CCAGGCTAGA CATTGTTCAG 
GAGAGGGAAG CGGGCGGAGG GATATATTAC GGCCCTTTCA GCAGCCGCCA TCGGGTGGAA 
ACCGCTGTGG AAGGTCTCAG TGATATCTTC TTAATCCGTA AATGTTCCGC CCCCGGCCGG 
AGCAAGGGAG GGAATGGCTG CTTGTACCGG CAGCTGGGCA CCTGTGTCGG GGTGTGTACC 
GGGAAGGTCA GTTCTGAGGA ATACAGGGAG AGGCTGGATG GAGTTTGCCA AGCGATTGAA 
GCCGGGGACA AGGGAGCCAT GAAGGAGCTT AGCAGCCGGA TGGCAAGAGC GGTCGAGGGG 
CTAAATTTTG AAATGGCTGC CCGTTATCGG GAGTATCTGC TGGGGTTACG CTATATACAA 
GGAAGACAAA AATTCCTCAA GGGTACATAT CGCAATAAAA GCCTGCTGGC CCTTGAACAG 
TTGGACACTG AAAAAAAGAC TGTCAAGGTC TTCCTGATCA AAGGAAATAG AGTAGTGACG 
AGCAGAGTGC TCACTTGGCT TGATGAGGAT TTAAAGCAAT TTCTCAGGGA AATCACTCAA 
GCCCTGGCGG ACCAGCCAGG CTGTTCCCGA CAGCTGACAC AGCAGGAAGT GGACGAGGCT 
CAAATCCTTG ATTCCTATCT CCGCAAAGAC CGGGTTATCT CTATTCCCAT TACCCAAAAA 
GCGCTGAAGC AAGGGGCGTT CGTTGAGGAT ATGCTCAAGC GGATTAATCT CAAGAGAATT 
AATGAAGAAG AGAAGAAAAA GGGGGATAAT TATGGCCAGG AAATCCTTTA A
 
Protein sequence
MEDKNCLKEK LKDLPEQPGV YLMQDSLGNI IYVGKAKNLK NRVSQYFYKQ KDRDPKVEEM 
ILRIADWEYR IVDTELDALL EECRLIKEIK PHYNRQMKNH QKYVYIKIPD ESFPRLDIVQ 
EREAGGGIYY GPFSSRHRVE TAVEGLSDIF LIRKCSAPGR SKGGNGCLYR QLGTCVGVCT 
GKVSSEEYRE RLDGVCQAIE AGDKGAMKEL SSRMARAVEG LNFEMAARYR EYLLGLRYIQ 
GRQKFLKGTY RNKSLLALEQ LDTEKKTVKV FLIKGNRVVT SRVLTWLDED LKQFLREITQ 
ALADQPGCSR QLTQQEVDEA QILDSYLRKD RVISIPITQK ALKQGAFVED MLKRINLKRI 
NEEEKKKGDN YGQEIL