Gene Dhaf_2199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2199 
Symbol 
ID7259168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2378160 
End bp2379329 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content52% 
IMG OID643562089 
Productpeptidase T-like protein 
Protein accessionYP_002458669 
Protein GI219668234 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2195] Di- and tripeptidases 
TIGRFAM ID[TIGR01883] peptidase T-like protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAT GGATCAACGA AAAACGGCTG ATCGCCTCGT TCTGCGATTT GGTTACCATA 
GACTCTTTGT CCTACCGGGA AAGGGATATG GCAGATGAAT TGCTAAGACG CTTAAAACGG
TTGGGATTTG AGGTGTGGGA AGATGATGCC GGCCCCAAGA TTGGGGGCAG TGCAGGCAAT
ATTATTGCCA AATTGAAAGG AATCGTCGAA AAAGAGGCCC TTTTATTCAC CGCTCATATG
GATACGGTGC AGCCCGGAAC CGCTAAAACG CCTCTGCTCA GCGGAAAGCG GATTCATACG
GATGGAACGA CGGTTCTGGG AGGGGACGAT GCTGCCGGCA TAGCCTGTAT CCTGGAAATG
GCGGCAAGCT TGCGGGAGCA TAAGCTGGAC CATGGAGATA TCTATGTGAT CTTTACCGTG
GCGGAAGAGA TGGGTCTTCA GGGGGCAAAG AATCTGAACC CCGCTGTGAT GGAGAAAGTC
AAGGCAAACT ATGGCTTCGT CCTGGATGAT GCGGGAAAAG CAGGAGGGGT GGTGGCGGCG
GCCCCTGCCC ATGTCAAGCG GCACATCACG ATTCGGGGCA AAAGCGCTCA TGCCGGCGTG
GAGCCGGAAA AAGGCATTGA TGCGGTCAGG ATTATGGCCG AAGCGGTATA TCATATGCAG
CTGGGCCGCC TTGATGAGGA AACGACGGCC AACCTGGGGA TGATAAAAGG CGGAGAGGCG
GGCAATACGG TCTGCGGACA GCTGGAGATT CTTGGTGAGG TAAGAAGCAG GAACCCGGAG
AAATTGGCGA AGCAGCTGAA GGCTATGCAA AGGTGTTTTG AAGAGGCTGC CCGGAATTGG
GGAGGGGCCG TTGAGTTTGA GGATGAACTG CTTTACGGTG CTATCGATTT GCGACGGCAT
CCGGACCTGC AAAAGCTTCT GGAAAAGGCT GCGGAAAAGA TCGGATTGCC CATGGATTAC
CACAGCTCCG GAGGAGGCAG TGATGCCAAT ATCTTGAACA GTCTGGGCTT TCCTTGCGTA
ACCTTGTCAT CGGCGTTTTA CGCTATGCAT ACGGTACAGG AGTATGTCGA CATTGAGGAG
ATGATTCGAT TAACGGAATT CATGCTGTCG ATCACACAAA GTGTAGAAGC TGTAGAAAAG
GCCGGGGTAA GAAACTTAAC AACGGAGTGA
 
Protein sequence
MNRWINEKRL IASFCDLVTI DSLSYRERDM ADELLRRLKR LGFEVWEDDA GPKIGGSAGN 
IIAKLKGIVE KEALLFTAHM DTVQPGTAKT PLLSGKRIHT DGTTVLGGDD AAGIACILEM
AASLREHKLD HGDIYVIFTV AEEMGLQGAK NLNPAVMEKV KANYGFVLDD AGKAGGVVAA
APAHVKRHIT IRGKSAHAGV EPEKGIDAVR IMAEAVYHMQ LGRLDEETTA NLGMIKGGEA
GNTVCGQLEI LGEVRSRNPE KLAKQLKAMQ RCFEEAARNW GGAVEFEDEL LYGAIDLRRH
PDLQKLLEKA AEKIGLPMDY HSSGGGSDAN ILNSLGFPCV TLSSAFYAMH TVQEYVDIEE
MIRLTEFMLS ITQSVEAVEK AGVRNLTTE