Gene Dhaf_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2179 
Symbol 
ID7259148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2349766 
End bp2350344 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID643562069 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458649 
Protein GI219668214 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGACA AGAAAGAAGC GGCAGAACAA CCCATCGACA TGCGCCGGCA TATTCTCACT 
GTGGCCGGTG GATTAATGAT TGAAAAAGGA GTCAAGGAAA CCAGCTTAAA AGACATTGCC 
CAGGAAGCGG GGATTAGCAA GGGGACATTA TATTACTACT ATTCAGCTAA AGAAGACATT 
ATTTATGACA TTGCCAACCA TAACTTAAAA CAAATTACGG ACGGTTTGCT GGCCTGGATT 
GAAGATGCCA ATACAGAAGT TGCCCCTGAG GAGGTCCTGA AAACAGTATT TGAACAAATA 
TTGGGGGCTG AAACCAGGGG AAAGCTTCAT CTTTATCTTC TCAGCGATGC AGGAACAAGC 
AATACTCTTC TCAAAGAAAA ATTCAAAGAA CAGTATCAAG AGTGGAGAAA AACCTTGCAA 
TATGGTTTGG ATAAGATCTT ACCCTCCCAG AACCAAAAGA ACGTAATGCT TTCCTACTTA 
ATCCTGGCTG CCCTTGACGG GCTGATTATC CAAAGGTTGT TCGGAACCGA AGAGATTCCT 
GTGCAAGAAA TCGTCAAGCT CTTGGTAAAT GCCGAATAG
 
Protein sequence
MTDKKEAAEQ PIDMRRHILT VAGGLMIEKG VKETSLKDIA QEAGISKGTL YYYYSAKEDI 
IYDIANHNLK QITDGLLAWI EDANTEVAPE EVLKTVFEQI LGAETRGKLH LYLLSDAGTS 
NTLLKEKFKE QYQEWRKTLQ YGLDKILPSQ NQKNVMLSYL ILAALDGLII QRLFGTEEIP 
VQEIVKLLVN AE