Gene Dhaf_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2168 
Symbol 
ID7259137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2334901 
End bp2336619 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content54% 
IMG OID643562058 
ProductABC transporter related 
Protein accessionYP_002458638 
Protein GI219668203 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTT ACTATAACTA TTTAGGAAAA TATAAAATCC CCTTTTTGAT TGCGGTGCTC 
TGTGTGACTC TGGAAGCAGT CTGTGATTTG CTGGGACCTA CCCTGATGGC CCGCATTATC
AATCAAGGAA TCGAAAAGGG CTCCCTGGCC GAGGTCTATT ACTGGGGGGC CTTGATGCTG
GCGGTAACCC TGCTGGGGGC CTGTTTTGCT GTAACCAGAA GCAATCTGTC CAGCTATGTT
TCCCAAAGGA TGGGCGGGGA TTTGCGGGCA GATTTATTTG GGAAAATCAT CTCCTTTGCC
GAGCAGAGCG GAGATAAAAT CGACGGCGGG TCCCTGATCA CCAGAATGAC CAATGACACT
TCCCAAATCG TTCAGTTCGT CAATGGGATG ATGCGTATTT TCCTCAAGGC TCCCCTGACT
GGTATCGGCA GTGTGATCCT GGCCAGCTGG CTGAATTTCC GGCTCAGCCT TATTATCTAT
GGGGTAGTGG CTGTGGTTTC CTTATTGATT TATGCCAGCA TGAAGTTCAG CTATCCCCGC
TTTTATCAAT TGCAAAAGGC TGTGGACCGG GTCAATCTGA AGGTCCAGGA ATATTTAATC
GGGATCCGGC TGGTGAAAGC CTTTGGGACC TATGAGCAAG AGACGGAAAA ATTTGCCGAA
GCCAACCGGG AGCTCATGCA GAAGGGGATC TCCTCCCAGA TGGTGATTAC CGTGATCTCT
CCCTTTCTTA CTCTGGTGGT GGGGACCGGA ACTGCCGCGG TGATCTTTTT GGGCAGCCGC
CTGTTTATGC TGGATTTGGC TGATCTTGGC GATATGATGG CCTTTACCAT TTATATGGCC
CAGATTTTGA CCTCGTTGAT TATGCTCACC ACTGTTTTTA CTACGTTCGT ACGGACCAAG
GCTTCAATGG AGCGGATCGG GGAAGTGCTG GACTGTGCCG AAGATTTTCC CCCCAGCGGG
GCAGGGAGAA AGCTGCAGGG GAAGATCACC TTTGACAAGG TTACCTTTGC TTATCCTAAC
GGCAGCGGGG TCCCGGCCAT CCGGGAACTT TCCTTCACCG TCAATCCCGG CGGGAGCCTG
GCCATTATCG GTCCCACCGG CAGCGGCAAA TCAACCATTG CCTGGCTGCT GCTGCGCTTT
TATGATGCGG ACAGGGGCAG GATCATGCTG GACGATTACC CTATCCAGGA GCTGGGCGCC
GACGAAATCC GCCATAATAT CGCTATCGTT CCCCAGAAGC CCCTGCTGTT TTCCGGAACG
GTAGCGGAAA ACCTCCGCTG GGGGGATAAA CAGGCCTCCC CGGAGGAGCT CAGGCAGGCG
GCGGAAAAGG CCCAGGCCGA CTTTATCGGG CAGATGGCGG AGGGGTACGA CAGCCTCCTG
GGCAGCGAAG GGGTCAATCT GTCCGGAGGG CAGAAGCAGC GTCTTTCTCT GGCCCGGGCG
ATCCTGAAAA AAGCCCCGAT CCTGATCCTG GACGATGCCA CCAGTGCCCT GGATGCGGTG
ACCGAAGCTA AGGTAAGGGA AAATCTTAAG CATAATGACT ACCGGCAAAC GCTGGTGATG
ATCACCCAGC GCTGCGGAAC AGCCATGTCG GCGGATCAGA TTCTGGTCAT GGAGAATGGC
CGGCCAGCGG GCTTGGGGTC TCATGAGGAA TTGATGAGGA CCTGTGCTAT TTATCAGGAT
ATTTATCATA CACAGCTGGA AAGCAGCAGG GAGGCTTAA
 
Protein sequence
MTLYYNYLGK YKIPFLIAVL CVTLEAVCDL LGPTLMARII NQGIEKGSLA EVYYWGALML 
AVTLLGACFA VTRSNLSSYV SQRMGGDLRA DLFGKIISFA EQSGDKIDGG SLITRMTNDT
SQIVQFVNGM MRIFLKAPLT GIGSVILASW LNFRLSLIIY GVVAVVSLLI YASMKFSYPR
FYQLQKAVDR VNLKVQEYLI GIRLVKAFGT YEQETEKFAE ANRELMQKGI SSQMVITVIS
PFLTLVVGTG TAAVIFLGSR LFMLDLADLG DMMAFTIYMA QILTSLIMLT TVFTTFVRTK
ASMERIGEVL DCAEDFPPSG AGRKLQGKIT FDKVTFAYPN GSGVPAIREL SFTVNPGGSL
AIIGPTGSGK STIAWLLLRF YDADRGRIML DDYPIQELGA DEIRHNIAIV PQKPLLFSGT
VAENLRWGDK QASPEELRQA AEKAQADFIG QMAEGYDSLL GSEGVNLSGG QKQRLSLARA
ILKKAPILIL DDATSALDAV TEAKVRENLK HNDYRQTLVM ITQRCGTAMS ADQILVMENG
RPAGLGSHEE LMRTCAIYQD IYHTQLESSR EA