| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2128 |
|---|
| Symbol | |
|---|
| ID | 7259097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2295435 |
|---|
| End bp | 2297171 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643562020 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002458600 |
|---|
| Protein GI | 219668165 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.976048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA AATTGCTTGC GCTGACGGAT AAATCCCATA AAGAACTGAA AAAATCCATC
CTGGCCTCGT TTCTCGCCCA GCTCAGCCTG TCATTGCCGG TCATGATCCT GATGATGACC
TTTATCGAGA TTCTGCAGCC CTTCTGGGGA GGGGAAGTGG AGTGGCCCAA GCTTTGGATT
CTCGCCGCTG CTTCGGTGGT GGTTGTGGTG CTGGCTTTCA TAGCCCATCG CTATGAATAT
GGGAAAACCT ATGTGACCGC CTATGAAGCC GCCGAAGAAA AGCGCACCGG CCTTGCCGAG
CATTTGCGGA AACTGCCCCT TTCCTATTTT GGCAAAAAAG ATCTGACCGA AATCACCGTC
AATATGATGA GCGACTGCGG CACCATCGAA CAGAGCTTTT CCTCCATCAT CCCCGCCTTT
GGCGGAACCC TGATCAACTT GCTGTTCACC TGTGTGCTGC TGGCCGTTTT CGATTGGCGC
ATGGCCCTGG CTATTTTTAT CAGCGTTCCC GTATCCTTCG GCTTTTTATT GCTTTGCCGG
ACCATGCATG ACCGCATCGG GCGGGCTCAT CTGCAGAGCA AGCTGGACGC CTCCGAACAG
ATGCAGGAAT ATCTGGAGGG TATTAAGGTC ATTAAAGCCT TTGGTTTGGG TGGCGACAAA
TTTAAAAGCC TGGAAGAAGC TTACCGCCAA CTGATGAAGA TCAGCACAAA GACGGAAACG
GTCAACGGCG CCCTAACCAC CATCTCCATG ATGATGCTGC GCTTTAGTAT CCCGCTCACC
ATCTTCGTAG GGCTGAGCCT GGTCACGGCG GGGAGCTTGG ATCTCCTTTA CTTCCTCCTG
TTCCTTATTT TCTCCAGCCG CATCTACACC AGCCTTTCCA CCCCCTTGGC TTTATGGGGG
GACTTGCTCT ACTCCTTGCT TGCTATCAAA CGGCTGCATG AGGTCTACGA AGAAACACCC
ATGGGGGGAA GTGATGGGGT GGTCTTGCAG CATTATACCA TTGAGTTTGA TCATGTCAGC
TTCGGCTATC AGGAAGAAGC GGTGATCAAA GACATTAGCT TCTCCATTCC CCAGGGCAAG
GTCACGGCGC TGGTGGGCCC TTCCGGCAGC GGGAAAAGCA CCCTATCCAA GCTGATTGCC
CGGTTTTGGA ATGTGGACGC CGGCAGCATC CGCATTGACG GCACGGATAT CCGCAAAATC
GACCCGGAAC GCCTGCTGAC CTGGATATCC TTTGTGTTTC AGGATGTGGT TCTGTTCAAT
GATACCATCT ACAACAATAT TGCCATCGGC AAAAGCGGAG CAACCCGGGA GGAGGTTGAG
GAAGCGGCCC GCCGCGCCAA CTGCCATGAT TTTGTCTCCC GGCTGCCTGA GGGGTACGAT
ACCCTGGTCG GTGAAAACGG CAGCACTCTG TCGGGCGGGG AGCGGCAGCG CATTTCCATT
GCCCGGGCCC TGCTCAAGGA TGCCCCCATC ATCCTGCTGG ATGAAGCCAC CGCTTCTCTC
GATCCGGAAA ATGAACTGGA GATCCAGGAA GCCCTCTCCC AGCTGATCAA GGACAAAACC
GTGGTGGTCA TCGCCCACAG GCTGCGCACC ATAGCCGGGG CGGACAACAT TGTGGTGCTG
GAGAACGGGC GGATCGCCGA GCAGGGCTCC GGGCCGGAGC TCTTGCGGGC AGGGGGGCTT
TATGCAAAGT TGTTCGGCAT CCAGCAGGAA ACAGCCGGAT GGGCAGTCGA AGCGTGA
|
|---|
| Protein sequence | MLKKLLALTD KSHKELKKSI LASFLAQLSL SLPVMILMMT FIEILQPFWG GEVEWPKLWI
LAAASVVVVV LAFIAHRYEY GKTYVTAYEA AEEKRTGLAE HLRKLPLSYF GKKDLTEITV
NMMSDCGTIE QSFSSIIPAF GGTLINLLFT CVLLAVFDWR MALAIFISVP VSFGFLLLCR
TMHDRIGRAH LQSKLDASEQ MQEYLEGIKV IKAFGLGGDK FKSLEEAYRQ LMKISTKTET
VNGALTTISM MMLRFSIPLT IFVGLSLVTA GSLDLLYFLL FLIFSSRIYT SLSTPLALWG
DLLYSLLAIK RLHEVYEETP MGGSDGVVLQ HYTIEFDHVS FGYQEEAVIK DISFSIPQGK
VTALVGPSGS GKSTLSKLIA RFWNVDAGSI RIDGTDIRKI DPERLLTWIS FVFQDVVLFN
DTIYNNIAIG KSGATREEVE EAARRANCHD FVSRLPEGYD TLVGENGSTL SGGERQRISI
ARALLKDAPI ILLDEATASL DPENELEIQE ALSQLIKDKT VVVIAHRLRT IAGADNIVVL
ENGRIAEQGS GPELLRAGGL YAKLFGIQQE TAGWAVEA
|
|---|
| |