Gene Dhaf_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2087 
Symbol 
ID7259056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2250435 
End bp2251484 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID643561980 
Producttransport system permease protein 
Protein accessionYP_002458560 
Protein GI219668125 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0285483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAC ATGAGTTGAG TATAAAGCAA CCAAATCCTG TCCAAGAGGG CTTTTACCGC 
CGACGGGTCC GCATTGCCGT GGTGACCCTG CTCTTATTAA TCCTGACCTT GTTCCTGTGC
GGGACGATGC TCTATCTGGG CAATACCCGT TATTCTTTGG GGGAGATCAT CAGGGTTCTT
TTAGGTGAAC AGATCAAAGG GGCTACCTTT GCCATCGGCA CGTTGCGGCT GCCCAGGATG
CTGGCCGGAC TGCTGGCGGG CATGGCTTTT GGCATGGCGG GAAGGACGTT TCAGACCATG
CTCAGAAACC CTCTGGCCAG CCCGGATATT ATCGGGGTGG CTTCCGGCTC CAGTCTGGCC
GCCGTGTTCT GTATTATTAT CTTGAAAATA AGCGGCCCCT TGGTTTCTTT AGCGGCAGTC
ACCACAGGGC TGGCTGTGGC CTTCCTGATC TACATGCTTT CCCGGAGAGG GAGTTTTTCC
GGGGGACGAT TGATTTTGAT CGGCATTGGC GTTCAGGCTA TGCTGAACTC CTTGATCTCT
TTCTTGCTGC TGAGAGCCAA TCAATACGAT GTGCCAGCTG CCCTGCGCTG GCTTAGCGGC
AGTTTAAACG GCATGCAAAT GAAGTCTATG CCGGGGCTTT TCCTGGTGGT GCTGAGCTTT
GGCAGTGTGT TGGTTCTGCT GAGCAGGCAG CTGAAGATCC TGGAACTGGG AGACCAGTCC
GCTATCACCC TGGGGTTGAG GACGGACCGG ATCCGTTTGG CCCTGGTGCT CAGCGCTGTT
TTCTTGATTG CCTATGCCAC AGCCGTCACG GGTCCCATCG CCTTTGTGGC TTTTCTGGCC
GGTCCCATCG CCGGCCGTTT GGCAGGCCCG GGTTCGTCAA ATATCCTGCC GGCAGGTCTG
ACAGGAGCAG TCCTGGTGCT TTTGGCAGAT AGTATTGGGC AGTTTGTCTT TGACATTCGT
TTTCCGGTGG GGATTATTAC TGGAATCCTG GGTGCGCCTT ATCTGTTGTA TTTATTGATC
CGTATGAATC GAACCGGAGG AGCTGCATGA
 
Protein sequence
MIKHELSIKQ PNPVQEGFYR RRVRIAVVTL LLLILTLFLC GTMLYLGNTR YSLGEIIRVL 
LGEQIKGATF AIGTLRLPRM LAGLLAGMAF GMAGRTFQTM LRNPLASPDI IGVASGSSLA
AVFCIIILKI SGPLVSLAAV TTGLAVAFLI YMLSRRGSFS GGRLILIGIG VQAMLNSLIS
FLLLRANQYD VPAALRWLSG SLNGMQMKSM PGLFLVVLSF GSVLVLLSRQ LKILELGDQS
AITLGLRTDR IRLALVLSAV FLIAYATAVT GPIAFVAFLA GPIAGRLAGP GSSNILPAGL
TGAVLVLLAD SIGQFVFDIR FPVGIITGIL GAPYLLYLLI RMNRTGGAA