Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2087 |
Symbol | |
ID | 7259056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2250435 |
End bp | 2251484 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643561980 |
Product | transport system permease protein |
Protein accession | YP_002458560 |
Protein GI | 219668125 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4779] ABC-type enterobactin transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0285483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAC ATGAGTTGAG TATAAAGCAA CCAAATCCTG TCCAAGAGGG CTTTTACCGC CGACGGGTCC GCATTGCCGT GGTGACCCTG CTCTTATTAA TCCTGACCTT GTTCCTGTGC GGGACGATGC TCTATCTGGG CAATACCCGT TATTCTTTGG GGGAGATCAT CAGGGTTCTT TTAGGTGAAC AGATCAAAGG GGCTACCTTT GCCATCGGCA CGTTGCGGCT GCCCAGGATG CTGGCCGGAC TGCTGGCGGG CATGGCTTTT GGCATGGCGG GAAGGACGTT TCAGACCATG CTCAGAAACC CTCTGGCCAG CCCGGATATT ATCGGGGTGG CTTCCGGCTC CAGTCTGGCC GCCGTGTTCT GTATTATTAT CTTGAAAATA AGCGGCCCCT TGGTTTCTTT AGCGGCAGTC ACCACAGGGC TGGCTGTGGC CTTCCTGATC TACATGCTTT CCCGGAGAGG GAGTTTTTCC GGGGGACGAT TGATTTTGAT CGGCATTGGC GTTCAGGCTA TGCTGAACTC CTTGATCTCT TTCTTGCTGC TGAGAGCCAA TCAATACGAT GTGCCAGCTG CCCTGCGCTG GCTTAGCGGC AGTTTAAACG GCATGCAAAT GAAGTCTATG CCGGGGCTTT TCCTGGTGGT GCTGAGCTTT GGCAGTGTGT TGGTTCTGCT GAGCAGGCAG CTGAAGATCC TGGAACTGGG AGACCAGTCC GCTATCACCC TGGGGTTGAG GACGGACCGG ATCCGTTTGG CCCTGGTGCT CAGCGCTGTT TTCTTGATTG CCTATGCCAC AGCCGTCACG GGTCCCATCG CCTTTGTGGC TTTTCTGGCC GGTCCCATCG CCGGCCGTTT GGCAGGCCCG GGTTCGTCAA ATATCCTGCC GGCAGGTCTG ACAGGAGCAG TCCTGGTGCT TTTGGCAGAT AGTATTGGGC AGTTTGTCTT TGACATTCGT TTTCCGGTGG GGATTATTAC TGGAATCCTG GGTGCGCCTT ATCTGTTGTA TTTATTGATC CGTATGAATC GAACCGGAGG AGCTGCATGA
|
Protein sequence | MIKHELSIKQ PNPVQEGFYR RRVRIAVVTL LLLILTLFLC GTMLYLGNTR YSLGEIIRVL LGEQIKGATF AIGTLRLPRM LAGLLAGMAF GMAGRTFQTM LRNPLASPDI IGVASGSSLA AVFCIIILKI SGPLVSLAAV TTGLAVAFLI YMLSRRGSFS GGRLILIGIG VQAMLNSLIS FLLLRANQYD VPAALRWLSG SLNGMQMKSM PGLFLVVLSF GSVLVLLSRQ LKILELGDQS AITLGLRTDR IRLALVLSAV FLIAYATAVT GPIAFVAFLA GPIAGRLAGP GSSNILPAGL TGAVLVLLAD SIGQFVFDIR FPVGIITGIL GAPYLLYLLI RMNRTGGAA
|
| |