Gene Dhaf_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1998 
Symbol 
ID7258967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2151322 
End bp2152098 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID643561891 
Producthelix-turn-helix- domain containing protein AraC type 
Protein accessionYP_002458471 
Protein GI219668036 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACA TTATCAAATA CGGTAGAAAT GTTGGGGCAA TTTCAGATCG GGTGGAAGCG 
GATTCCCATA AACATTGGCT GCTGCAGCTG TTTCTTTCCA TTGAAAAGGA ACTGGACATT
AAAGTCAAGG GACAGCTTAT TCCTTGCCAT GCCCTGCTGG TCAACATGGA TACGGAGCAT
GCCTTCAACG CCGGAGGTGA TATCCATTTT ACGATGCTGA TTGATCCGAC CACAGAGCTG
GGACGCGCCA CGAGGCGGCT GCTGAAAGAA CAGAGTTTTT ATGTTTTGCC CCAGGCGGAT
ATAGCTGTGA TGCAGCAGGC TTTTCGCAAA GCCCTTGCCC GGAAGGAGCA TAGTTCCCTT
CTGTCCTTTG TGCAGAGTCT TGCCGCTTAT TTTACATCTG ACCATAGGGT AGCTGATAAA
GGAGCTGATA GAGGGGCTTT CGATGAGCGG ATCATCAGAG TTTTGGAGCT CCTGGCTTGC
TGTGTGGATG ATGATGCGAG CCATCAGCTC AAGTATTTTT CTCAGGAAAC GTATCTTTCG
GAAAGCCGTT TAGCCCATTT GTTCAAAGAT GAAACAGGCA TACCTTTGAA AAGCTATCTG
GTATTGCATA AATTGCAGCG GGCCTATGAG TCTATTTTTG CTGGGGAAAC TATCACAACG
GCAGCACTCA GAGCCGGGTT TGACAGTCCG TCCCATCTGG CCTATACCAA TAAAATGATG
ACCGGCATGT CGGCTACCAA TATTATAAAA GACAGCGAGT TTTTGAAAGT TTTTTGA
 
Protein sequence
MNYIIKYGRN VGAISDRVEA DSHKHWLLQL FLSIEKELDI KVKGQLIPCH ALLVNMDTEH 
AFNAGGDIHF TMLIDPTTEL GRATRRLLKE QSFYVLPQAD IAVMQQAFRK ALARKEHSSL
LSFVQSLAAY FTSDHRVADK GADRGAFDER IIRVLELLAC CVDDDASHQL KYFSQETYLS
ESRLAHLFKD ETGIPLKSYL VLHKLQRAYE SIFAGETITT AALRAGFDSP SHLAYTNKMM
TGMSATNIIK DSEFLKVF