| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1978 |
|---|
| Symbol | |
|---|
| ID | 7258947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2131708 |
|---|
| End bp | 2132598 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643561874 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_002458454 |
|---|
| Protein GI | 219668019 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.578395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC TTCATGGTAT ATATGCTCCC ATTCCTACCC CCTTTAAGGA TAATAAAATT
GCCCTTGATG AGTTGGCCGG CAATATGGAA TTCTGGCTGG CTTCCCAACT GGAGGGAATT
GTGGTCATGG GCTCCAACGG TGAATTTATC ATGCTCAGTC CGGAAGAAAA GTGTCAACTC
ATCACTGCCG TCTGCACTCA GGCAAAGGGT AAGAAACCGG TCGTTGTCGG AACGGGGTGT
GAGTCCACTC AGGAAACTAT TGAGTTCAAT CATTTTGCCG CCGGAGCAGG GGCTGACGCA
GCCCTGGTAT TAAGCCCGAA CTACTTCAAA AAAGCCATGA ATGATACTGT GCTGAAAAAG
TTCTACCTGG AAGTAGCAGA GGCCAGCCCG ATTCCGATCA TTCTTTATAA TATGCCAGGG
AACTCCGGCA TCAATCTTTC CGCCAAATTG GTAGCCGAAC TGGCTGACCA CCCTAATATT
ATCGGAATCA AGGATTCGGG CGGCAATATT GTCCAAATCG CGGAAATTAT TCACTCCGCA
CCGGATGACT TTGCAGTTTT TGCCGGTTCG GCCAGCTTTC TGTTCGCCAG CTTGGCCTTA
GGAGCTGCCG GCGGAACCCT GGCTTTGGCC AATGTGTTCC CCAACGAGTG CGCCCGGCTT
CAGGAGCTTG TTGACAAGGG TAAATTTGCT GAAGCAAAGG AGCTGCAATT GAATTTGATC
GAAGCCAATA ATGCAGTAAC TACCCGCTGG GGTGTCGGTG GTTTGAAAGC GGCCCTTGAG
CTGATTGGTC TGTATGGCGG TGAACCCCGC AAGCCGTTGA TGCCCTTAGG TGACGAAGAC
AGGGAGCTGC TGGCGGCCAT TATTAAGCAC ACCCAGGAAG TCTGCCGTTA A
|
|---|
| Protein sequence | MFKLHGIYAP IPTPFKDNKI ALDELAGNME FWLASQLEGI VVMGSNGEFI MLSPEEKCQL
ITAVCTQAKG KKPVVVGTGC ESTQETIEFN HFAAGAGADA ALVLSPNYFK KAMNDTVLKK
FYLEVAEASP IPIILYNMPG NSGINLSAKL VAELADHPNI IGIKDSGGNI VQIAEIIHSA
PDDFAVFAGS ASFLFASLAL GAAGGTLALA NVFPNECARL QELVDKGKFA EAKELQLNLI
EANNAVTTRW GVGGLKAALE LIGLYGGEPR KPLMPLGDED RELLAAIIKH TQEVCR
|
|---|
| |