Gene Dhaf_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1945 
Symbol 
ID7258914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2091045 
End bp2091839 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID643561841 
ProductABC transporter related 
Protein accessionYP_002458421 
Protein GI219667986 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.446826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGA TCATCAACGC AACCAAAGTC TTTTTAAGCG GCACACCCAA CGAGCATATA 
GCGCTGAATA ACATCAGCCT CTCCCTGGCC CAAGGTGAAT TTGTGACCCT CATCGGTTCC
AACGGTGCCG GAAAATCCAC CCTCTTTAAC GCCATCGGCG GCACTTTCTG GCTAAACCGC
GGCCGGATTT TTCTGGAAGA GGAGAACATC ACTTACCTGG CTGAGCATAA ACGGGCCGCC
ATGATCGGAC GTTTGTTTCA GGATCCACTG AAGGGAACCG CTCCCGATAT GACCATCGAG
GAGAATCTGG CCCTGGCTTA TAACCGCCAA GGCCGGAATG GTCTGCGCCT AGGCGTGCAC
CCTCAGGATG TGAAAATCTT CCGTGAGAAA ATCGCCCAAT TGGATATGGG CCTTGAAAAC
CGCCTGCGGA CCAAGGTAGG ACTGCTCTCC GGCGGCCAGC GGCAGGCCCT TTCCCTGCTC
ATGTCCACCA TTGCCGGCCC CCGCCTGCTC CTGCTCGATG AGCATACTGC AGCCCTGGAC
CCGGCAGCTG CCGAAAAGAT CATGGCGATT ACCCGGGACA TCGTCAGTCA GGAGGGCATC
ACCACCATGA TGATCACCCA CAATATCCAG ACCGCTCTGA CAACCGGCTC GCGAACCATC
ATGCTGGACC AGGGCAAGAT CATCCTGGAT CTCGCAGGTG AGGAGCGCAA AGAAATGACG
GTTCCCCGTT TGCTGGAATT GTATTCTCAG CAAAGTAAAA CCGCCTTCGC TAATGATCGC
ATGCTGTTAA GTTAA
 
Protein sequence
MLKIINATKV FLSGTPNEHI ALNNISLSLA QGEFVTLIGS NGAGKSTLFN AIGGTFWLNR 
GRIFLEEENI TYLAEHKRAA MIGRLFQDPL KGTAPDMTIE ENLALAYNRQ GRNGLRLGVH
PQDVKIFREK IAQLDMGLEN RLRTKVGLLS GGQRQALSLL MSTIAGPRLL LLDEHTAALD
PAAAEKIMAI TRDIVSQEGI TTMMITHNIQ TALTTGSRTI MLDQGKIILD LAGEERKEMT
VPRLLELYSQ QSKTAFANDR MLLS