| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1684 |
|---|
| Symbol | |
|---|
| ID | 7258653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1797457 |
|---|
| End bp | 1798212 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643561586 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002458166 |
|---|
| Protein GI | 219667731 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA ATACAGTCGT ACTGACCGGG CGCTTAATGA AGCACATATT GCGCAGCCCG
GACACGATTA TCACGGTTGC GTTAACGCCG ATTGCGATGA TGCTGATGTT TGTCTATGTG
TTCGGCGGCG CGGTAAGAAT GAGCATGGGC GCTGATGTGA ATTATGTTAA TTACCAACTG
CCCGGCATTC TGTTGATTGC TATCGCGTCC GGCATAGCTT ACACTGCCTT TCGGTTGTTT
ATGGATATGC AGAAAGGGCT TTTCTCGCGG TTCAATTCCA TGCCGATCAG TCGTTCGTCG
GTGCTGTGGA GTCATGTGCT GACCTCTCTG GTGTCCAACA TGCTTACCGT CGTTATTATT
ATCCTCGTTG CGCTGATTAT GGGCTTCCGT TCAAACGCGG GCATACTTAA CTGGCTCGCG
GCAGCGGGAA TACTCGCACT ATACACGCTT GCGCTGACAT GGATCGCGGT CATTCCGGGG
CTCACGGCAA AATCGATGGA GGGCGCGTCC TCGTTCTCAT ATCTACTGCT CTTCCTGCCC
TTTCTCAGTT CAGCTTTTGT GCCGACTGAA ACGATGCCCA AAGTCGTCCG TGTTTTTGCA
GAGAATCAGC CTGTAACGTC TATCGTGGAA ACAATACGCG TTTTGCTGAA TGCTGAACCC
GTCGGAAACG ATATCTGGAT AGCCCTGGCG TGGTGTGTCG GTATCATAGT TGTTGCTTAC
CTATTCGCGA TGAGGGCGTA TCGAAGCAGG ATATGA
|
|---|
| Protein sequence | MKNNTVVLTG RLMKHILRSP DTIITVALTP IAMMLMFVYV FGGAVRMSMG ADVNYVNYQL
PGILLIAIAS GIAYTAFRLF MDMQKGLFSR FNSMPISRSS VLWSHVLTSL VSNMLTVVII
ILVALIMGFR SNAGILNWLA AAGILALYTL ALTWIAVIPG LTAKSMEGAS SFSYLLLFLP
FLSSAFVPTE TMPKVVRVFA ENQPVTSIVE TIRVLLNAEP VGNDIWIALA WCVGIIVVAY
LFAMRAYRSR I
|
|---|
| |