| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1556 |
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| Symbol | |
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| ID | 7258525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1660745 |
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| End bp | 1661875 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643561462 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_002458042 |
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| Protein GI | 219667607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000119518 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA AAGAACTGCC CACACCCAGT TATGTGGTGG ATGAAAACCT GCTCAGGAGA
AATCTGGAGA TTTTGCAATC CGTTCAAGAG CGGACAGGGT GCAAGATCCT GCTGGCCTTG
AAAGGATTTT CCATGCATGC TGTGTTTCCT TTGGTGGGCC AATACCTGAA GGGTATCGCC
GCCAGCTCCT TGTTTGAGGC GCGACTTGGC GTTGCAGAGA TGGGCAAGGA AGTTCATGTC
TACTCACCGG CCTATATCGA AGAGGAGTTT GACGAGCTGC TGGGGTATTG TGATCATATG
GTGTTTAACT CCTTTGATCA GTGGCGCAAA TTCAAAGATA AGGTGAAAAA CCATCCTGGC
CACATTGAAT GTGGAATTCG GGTTAATCCT GAGTATTCGG AGATTGCCAC GGATATCTAT
AACCCCTGCT ATCAGAATTC CCGGCTGGGA GTGACCCTGG CCAATTTCAG GCCTGAAGAA
CTTGAGGGAA TCGCTGGGCT GCATTTCCAT ACCCTATGCG AACAGAATTC GGATACCCTG
GAACGCACCC TTAAAGTGGT GGAAGAGAAA TTCGGTGAAC ATCTCCGGAA GATGAAATGG
CTGAATCTGG GCGGCGGCCA TCATATTACC CGCCCTGATT ATGATATTGA GACCCTGGTC
CGCTGTATTC TTCATTTGCA GGAAAAATAC GGAGTGGAGA TCTATCTGGA GCCCGGAGAG
GCCATCGCCT TAAATACAGG GTTCCTAGTC ACCAAGGTGC TGGATATCGT GGATAATGGA
ATGAAGATCG CCTTACTTGA CGCTTCGGCG GCCTGCCATA TGCCCGATGT CCTGGAGATG
CCCTATCGTC CGGCGATTAT CAATGGAGGG GAGCCGGGGG AACATCCCTA CACCTATCGG
TTGGGCGGCA ATACCTGTCT GGCCGGGGAT GTGATCGGCG ACTATTCCTT TGCCGAACCC
TTAAAGCCGG GGGACAAGCT TATCTTCTGC GATATGGCTC ATTACACCAT GGTCAAGAAT
AATATGTTCA ACGGGGTAAA CCTGCCCAAT ATTATGCTCT ACAATGAAAA AGAAGGCTTT
AAGCTGATTC GCCGTTTTGG CTATGAGGAT TTCAAAAACC GATTATCTTA G
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| Protein sequence | MNIKELPTPS YVVDENLLRR NLEILQSVQE RTGCKILLAL KGFSMHAVFP LVGQYLKGIA
ASSLFEARLG VAEMGKEVHV YSPAYIEEEF DELLGYCDHM VFNSFDQWRK FKDKVKNHPG
HIECGIRVNP EYSEIATDIY NPCYQNSRLG VTLANFRPEE LEGIAGLHFH TLCEQNSDTL
ERTLKVVEEK FGEHLRKMKW LNLGGGHHIT RPDYDIETLV RCILHLQEKY GVEIYLEPGE
AIALNTGFLV TKVLDIVDNG MKIALLDASA ACHMPDVLEM PYRPAIINGG EPGEHPYTYR
LGGNTCLAGD VIGDYSFAEP LKPGDKLIFC DMAHYTMVKN NMFNGVNLPN IMLYNEKEGF
KLIRRFGYED FKNRLS
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