| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1330 |
|---|
| Symbol | |
|---|
| ID | 7258300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1439661 |
|---|
| End bp | 1440278 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643561242 |
|---|
| Product | protein of unknown function UPF0066 |
|---|
| Protein accession | YP_002457822 |
|---|
| Protein GI | 219667387 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.143351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG AATTGAAATC CATCGGGACC ATTCATACTC CCTATATACC AACACTGCCG
ATTCCTGAGC AACCTGTGCA GGACGCTCCC GGGGAATTCT GGATTTCCCT TAACCCTGAG
TATGTCGAGG GATTGAGCGA GCTTTCATCT TATCGCTACA TTACACTGCT TTTTTACCTT
GACAAGGTAT CTGAAAAGAG TTTAAAAGTT AACCCGTCTA TAGCGCCCGA ATTGGAAGTG
GGGGTTTTTG CCAGCCGCTC TCCCCGCCGT CCCAACCCTC TCGGCTTAAG TGTGGTGGAG
CTTAGAGGAA TTGAAGGAAA CGAGATTCTC ATTTCCAGCA TTGATGCCTA TAATGGTACG
CCTCTATTGG ATATTAAACC CTATATTAAG TCCATTGATA TAAAGGCTGA TGCCAATGAC
GGCTGGATGG ATACCCTTCC CGACAAGGAG CATCTCCTGG CTCATTTCCT GGGCCTCCCC
CACGACCATG CTCATGAGCA CTCCCACGAC CATGCCCATG AGCACTCCCA CGACCATGCC
CATGAGCACT CCCACGACCA TGCCCATGAG CACTCCCACG ACCATGCTCA TAAACACTCC
CACGACCATA ACCATTGA
|
|---|
| Protein sequence | MSIELKSIGT IHTPYIPTLP IPEQPVQDAP GEFWISLNPE YVEGLSELSS YRYITLLFYL
DKVSEKSLKV NPSIAPELEV GVFASRSPRR PNPLGLSVVE LRGIEGNEIL ISSIDAYNGT
PLLDIKPYIK SIDIKADAND GWMDTLPDKE HLLAHFLGLP HDHAHEHSHD HAHEHSHDHA
HEHSHDHAHE HSHDHAHKHS HDHNH
|
|---|
| |