Gene Dhaf_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1287 
Symbol 
ID7258257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1384432 
End bp1385010 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID643561199 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002457779 
Protein GI219667344 
COG category[R] General function prediction only 
COG ID[COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog 
TIGRFAM ID[TIGR00397] MauM/NapG family ferredoxin-type protein
[TIGR00402] ferredoxin-type protein NapF 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTAAGG GAAATGAACC CATCAGTCGG AGAGACTTCC TGGGCACTGT GGTCAATGAC 
TTTTGCAGGC TGACCATCAA TGCGGTCAAG GCCACAGCCC CCGGGAAAAG CCTCATAAGA
CCTCCTGGAG CGATAGAGGA AATCGCTTTT CTGGCCGGCT GTCAACGCTG TGGGAAGTGC
AGTGGAGCTT GTGAAGATAG GTCTATTCAC ATAGCCGGAC CGGATGAAGG AGTTTTAGTT
GGAACTCCTT ACCTTGTTCC TGATGAACAG CCTTGCACAT TCTGTCTGCG ATGTATTGAA
GTGTGTCCAA GTGGAGTTCT AGAGAAACGG GAGTCCAGCC AATCCTATGC TATAGGTGTG
GCCAAAATCA ATCAGGATCA TTGCCTCGCT TATCATGAAC AACTTTGCAG TTCCTGCCTT
TATGCCTGCC CGATGGGCAT AAAGGCCATT GAATTAAGAG ACTTTCGCTA TCCCATCATC
CGGACGGAAT GCTGCATTGG CTGCGGCCGA TGTATCAAGG CATGTATCGC GGAAAATCCT
GCAATCACTG TGGTACCATG CCCAACTAAG AAAGAATGA
 
Protein sequence
MLKGNEPISR RDFLGTVVND FCRLTINAVK ATAPGKSLIR PPGAIEEIAF LAGCQRCGKC 
SGACEDRSIH IAGPDEGVLV GTPYLVPDEQ PCTFCLRCIE VCPSGVLEKR ESSQSYAIGV
AKINQDHCLA YHEQLCSSCL YACPMGIKAI ELRDFRYPII RTECCIGCGR CIKACIAENP
AITVVPCPTK KE