Gene Dhaf_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1175 
Symbol 
ID7258145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1268971 
End bp1270746 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content55% 
IMG OID643561089 
ProductAcetolactate synthase 
Protein accessionYP_002457669 
Protein GI219667234 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.112778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTAT GGGGAAACGA GACAAATGAC ACCCGCTTGA CTGAATCTTT GGCGGCCGGT 
CGGGTAAGAA TGACTGGAGC CCAATTCCTG GCTGCTTTCT TAGCGAAGAA GGGGGTTTCC
CAAATCTATG GCATTCCTGG TGCGGCTATT CTGCCTTTCT ACGATGCCGT TCGTGAACTC
AATATGGAAT CCTATAATGT CCGCCATGAA CAGGCAGCCA TCTTTATGGC TGACGGCTAT
TCACGGGCCA CAGGAAAGGT AGGCGTGTGC GCCGCCACCT CCGGACCGGG CGCCACCAAC
TTTCTAACAG GTTTATACAG TGCCTACAGC GATTCCGTCC CTCTGCTGGC CCTGACCGGC
CAGGTTCCCA CTTCCCTGAT CGGCAAAGAC TCTTTCCAGG AGGCCCCTAT GGTTGAAATG
GCCCGCCCAG TGACCAAGGC CGCTTACCTG GTGGAGAAGG CGGGGGACCT TCCCCGGATT
CTCAAGGAAG GATGGGAGTT GGCCACCACA GGAAAAAAAG GCCCCATCTT GCTGGATCTC
CCTTTGGATG TCCAAAAGGG CCTTGTGGAA GTGGATTGGA GTGAATTCGA TTTTAGCCCA
CCCCAGCCCC CCAGGCAGGA GATTGCCCAA GATACATTGA ATACAATATT GTCCATGCTC
TATGAAGCCA AAACTCCTAC CCTGCTGGCA GGCGGCGGCA TTGTTCAGGG CAACGCAGCG
GAACTGCTGC GGGAAACGGC CGAGCTTCTC CAGATTCCCG TAGTGTCCTC CTTAATGGGC
AAGGATGCCT TTCCTAATGA TCATCCCCTC TATGGAGGGT TGGTGGGCAC GATGTGCCAA
ACTCCCCTGG GCAATAAAAC CATCCTGGAG TCCGACCTTA TTATCAATTT GGGAGGCCGC
TTCGATGGCC GGGGGACAGG AGACAGCCAA CGGTTCCAGT CGGGACGAAA AGTCGTCCAT
GTGAATCTGG ATAATAGAGA GCTTTCCCGC CATATCTCTA CCGAACTTGC CGTAGCAGCG
GATATAAGGG ACTTCCTGGA ACACTTCCTC GCCTTTCTGC GGGATAAGGG TTTCATTCCT
ACCCCTCAGG CCCGGCAACG AATTCTCGAC TTACAAGAGG AGCGCATCCG CTTGGCCCGC
CGCACGAAGT TCGACACCCT TCCCCTCAAG CCCCAGCAAG CCATTGCTGA GGTACGGGAG
GCCATGGCCC GGGATGGAAT TCTCACCTTG GATTGCGGCA TCAGCCAGAT CTGGGCTACC
CAGCTTTTTG AAGCCTATGT TCCCCGCTCC TTCCTGATTA CCGGCCGGGC GGGAACCATG
GGATGGGGAT TGGGAGCTGC ACTGGGAGCC AAGCTTGCAT ATCCTGACCG GCAAGTGGTT
AATCTTCTAG GGGATGCCAG TCTTGGCATG TCTTTGCAGG AACTGGCTAC GGCCGCCAAA
CACAATATTC CCGTGGTGGT GGTGGTCCTC AACAACTCCT TATTCGGACT GATCCGTCAG
CAGCAAAATC TGCTCTTTGA GCAGCGCTGT ATTTCCACCG ATCTTGAGTA TGAAAACCAT
GTGCAAGGTC ATTCCCGCGG CTTGGACTTT GTGGCCACAG CACGGGGAAT GGGAGTAGAA
GCGGAATTAG TCGACGGACC GGATCAAATT CAGGGAGCTC TGGCGCGTGC TTTCAGCCAA
AACCGCCCTT ACTTGATTGA GGTTCTCGTG GATCCTCTGG CCCAATGTTC CGTTTCCCTT
GACGGAACAC TCACCGGTGT CTTGGAACTT GAATGA
 
Protein sequence
MALWGNETND TRLTESLAAG RVRMTGAQFL AAFLAKKGVS QIYGIPGAAI LPFYDAVREL 
NMESYNVRHE QAAIFMADGY SRATGKVGVC AATSGPGATN FLTGLYSAYS DSVPLLALTG
QVPTSLIGKD SFQEAPMVEM ARPVTKAAYL VEKAGDLPRI LKEGWELATT GKKGPILLDL
PLDVQKGLVE VDWSEFDFSP PQPPRQEIAQ DTLNTILSML YEAKTPTLLA GGGIVQGNAA
ELLRETAELL QIPVVSSLMG KDAFPNDHPL YGGLVGTMCQ TPLGNKTILE SDLIINLGGR
FDGRGTGDSQ RFQSGRKVVH VNLDNRELSR HISTELAVAA DIRDFLEHFL AFLRDKGFIP
TPQARQRILD LQEERIRLAR RTKFDTLPLK PQQAIAEVRE AMARDGILTL DCGISQIWAT
QLFEAYVPRS FLITGRAGTM GWGLGAALGA KLAYPDRQVV NLLGDASLGM SLQELATAAK
HNIPVVVVVL NNSLFGLIRQ QQNLLFEQRC ISTDLEYENH VQGHSRGLDF VATARGMGVE
AELVDGPDQI QGALARAFSQ NRPYLIEVLV DPLAQCSVSL DGTLTGVLEL E