Gene Dhaf_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1164 
Symbol 
ID7258134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1257963 
End bp1258646 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID643561079 
ProductUspA domain protein 
Protein accessionYP_002457659 
Protein GI219667224 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AGAAAAAACA TATGGACGAA GGGCTCCTGG TTTGTATTTA TTATGGCCCT 
AACGGTGAGC GACTCATACG ACGTGGCAGC AAGATTGCGA AAATGTTTGA TTGCCCGCTC 
TATATATTGA CCGTGGATGC CAAACCTTTT GATGAGTTGG ATGCGGATAA ATCCATGTAT 
ATCACCAAGT GGAAAAAACT GGCCAAGGAA GTTGAGGCAG ACGGTTTTAT TCTCAAGGAT 
AATGAGCAGC GTCCCGTCTA CAAGGTAATC GCCGAAACAG CCCGGGAAAA GAGAGCCACC 
CAGATTATCA TGGGTCAAAC CGTTCAAAGC CGCTGGGAGC AGATTACCAA GGAATCTATT 
GTCAATTTGC TTTTAAAGGA AATCCCTTTC GTGGACCTTC ACATCATCTC GGTAGCCCGC 
TATATTAAAG ATCCGGACTG CAACTATGAA AAGGGTATCC GGGCTTATCT TATGAAGGAA 
GGAGAAAACT TCCGGCTGGT CTTTAAACAC AGCAAAGAAA TCGTCTATGA AGGTATCTTC 
TTTAAAGAAT TCGGCACCGA CTTTAATAAC GGGATTTTCA AGCTCATTAA AGATGGTGAA 
ACCTTACAGG TCCAGGTCAT TGAAGATATG GTTACCGAAT TGACCAATGT GGATATGGAA 
CCCAATGAGA ATAATGAAAA CTGA
 
Protein sequence
MFKKKKHMDE GLLVCIYYGP NGERLIRRGS KIAKMFDCPL YILTVDAKPF DELDADKSMY 
ITKWKKLAKE VEADGFILKD NEQRPVYKVI AETAREKRAT QIIMGQTVQS RWEQITKESI 
VNLLLKEIPF VDLHIISVAR YIKDPDCNYE KGIRAYLMKE GENFRLVFKH SKEIVYEGIF 
FKEFGTDFNN GIFKLIKDGE TLQVQVIEDM VTELTNVDME PNENNEN