| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1109 |
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| Symbol | |
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| ID | 7258078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1199651 |
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| End bp | 1201198 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643561024 |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_002457605 |
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| Protein GI | 219667170 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCT GTATGGGAAT CATAGAAGAT GGAATCTCCG GAGATATTAT TTATAAAAAC
TATCTGAATA CCGATATTCC CTTTAATTTG GAGAGAGCGG AAATGTATTG CGAGAGTACG
AAGGTTTTAA ATGCCGGGGT TCTCAACATT GCTCATGCTG AGAATTTACC GGAAGAGATG
ATCGTGCAAG AAGGGGCGGC ACTGATCTGC ATCGGTATGC CTGCAGAATT GTATACTAAA
TCGCCGCTTA TATTACTTGT ACTTGATCAG TCCAAGAAAG TAGCCGAGCT GTCCAACGAA
GTTAACCGGA TTTTTTTTGA ATATAATTCT CTGGAACTTA GACTCCATGA GGCGGTTAAT
AAGGGAAAAA GCATTCAATA CCTGGTTGAG CAAATGGCGC AGTTTTTAAA CAATGAACTG
GTTGTGATGA ACGCTGAATT CAAGTTGATC GGTCAATCAA ACAGTACGAT TCATATGTGT
GAGATTTCTG GTATTAAGCA GCCTGACAGC CATGGCAGGC TCTCGACGGA GCATGTGGAA
TTTTTTAAGA ATGATCTTAT TTATTCCAAT GTAAAAAACA TGAGGGAACC TTTTATCTAT
GAACCCAGTA TTTTCATTTG CCGGGTTATT TGTATGAATG TGTTCTTCCA GGATGATTTT
GTATGCCGAG TCGTAATCGC CGAGGATCGC AGTACTTTTC GGGGTTATGA AGCCGGGCTT
TTGCATTTTT TCACATCCTT TATTCAACTT GTATACGACC TGGCCGGCTA CAGTGGTGAC
ATTATGCCGC GAGAACATAT GGTTGAGATT TTCTCCGCCC TTATCAGCGG CGAATCGATT
GAAAGCTGGC GCTTGAAAAA CAGTGTTTCA CAGCATGGCT GGAATTATGA CGGGCCTTTC
CTGTGCGCCA GTATAATGCC GAGTGATAGG GATTACTATA ACCGGACAAT CCCGTATTAT
TGTCAGATGA TCAATCGCGA TTTCAAAGGC TGCTGTGCCT TTGAGTATGA ACGTAAAATT
GTTTGCATTG TCAATTTGGA GTATTACAAT GGTTCGGGAG AATGTTTCAA CTCGGTCTAT
TTAGAGACTC TGCGGGACGG TTATTTCCGA GTGGGATACA GTAATGTTTT TACCAGTATC
GTGGATATTC AAGCTCATTA TGTGCAGGCT AAAATCAGCT TGAGAATTGG CTTAGACCAA
TTCCCTTCCC GTTGGTATTA TAAATTTTCA GATATTGTCC TTTTTTATAT GGAATCCAAG
CTAACTGAAG AACTGGACGG ACAATTTCTG TGTTCCCCTA AAATCATCGG CCTGGATAGC
TACGATAGGG CGAATTCGAG TGATTACCTT CACACATTAA AGGTTTACCT GGACAATCAA
ATGAACGCAG TCAAGACTGC AAAAGATTTA TTTATTCATC GTGCCACGAT GGTCAATCGA
TTAGAGAGAA TTAAAGAGTT GGCCGGCATA AATTTCAAGG ACCCTGATGA CATTCTCTAT
ATAAAAATAT CTATCAGACT TTTTTATAAA GCTGATAGAC GGGGATAG
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| Protein sequence | MKLCMGIIED GISGDIIYKN YLNTDIPFNL ERAEMYCEST KVLNAGVLNI AHAENLPEEM
IVQEGAALIC IGMPAELYTK SPLILLVLDQ SKKVAELSNE VNRIFFEYNS LELRLHEAVN
KGKSIQYLVE QMAQFLNNEL VVMNAEFKLI GQSNSTIHMC EISGIKQPDS HGRLSTEHVE
FFKNDLIYSN VKNMREPFIY EPSIFICRVI CMNVFFQDDF VCRVVIAEDR STFRGYEAGL
LHFFTSFIQL VYDLAGYSGD IMPREHMVEI FSALISGESI ESWRLKNSVS QHGWNYDGPF
LCASIMPSDR DYYNRTIPYY CQMINRDFKG CCAFEYERKI VCIVNLEYYN GSGECFNSVY
LETLRDGYFR VGYSNVFTSI VDIQAHYVQA KISLRIGLDQ FPSRWYYKFS DIVLFYMESK
LTEELDGQFL CSPKIIGLDS YDRANSSDYL HTLKVYLDNQ MNAVKTAKDL FIHRATMVNR
LERIKELAGI NFKDPDDILY IKISIRLFYK ADRRG
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