| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0639 |
|---|
| Symbol | |
|---|
| ID | 7257606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 715518 |
|---|
| End bp | 718931 |
|---|
| Gene Length | 3414 bp |
|---|
| Protein Length | 1137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643560556 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002457140 |
|---|
| Protein GI | 219666705 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1483] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA ATCATGTGCA GGTTTCGCAG GGCTTTCGCA TTCTACTTGG GGCATTCGCG
CCCTATATCG CCCGCGAATT GAGTAATGAG TTCGGCAAAG ATTGGTGGAA TGTCGCCGTG
CTGGACACGC TCTACGACGA TCAGAAGCGC GATCTCCCGT ATTCAGGCGA CTGGGCGAAG
CTGGTCGACT CCCTCGACAT CGCCCGTTGC CTCCTGCTGT TCGATTTGCA TTGGCAGAGA
GTGCTCCGCA AGAAACTGTC CATTGACCAC CGCACTTGGG CAAAAGAACT GGTCGGTGTA
AGGAACAAGC TGGCGCATCT CGGTGGCGAG GACTTCTCCT CCGATGATAC TTGGCGCGCC
CTTGACACGA TGTCCCGCCT TGCTGACCAG ATTGATCCCG AAAGTGCCGA GGAAATTCGC
GGTTTGCTCC GCACTTCCCG CTACGGTTCG GCGGATGGTT CGACAACCGT AACGGAAGTA
TTAGCCGCTC CCGCCCCCGG CAAACAAAAG AATGCGGGCA TACTGAACAC CACGCCGATC
AGCGGGCTTC CCAGCTGGCG CGACATTATC GAGCCGCACC CCGACGTTGC ACAGGGGCGT
TACAAGAATG CCGAATTTGC CGCCGATCTC GCACAGGTCG CCCGCGGCGA GGGCGCGTTT
GAATACCGCG ACCCCGTGGA ATTCTTTGCT CGTACTTATG TTACCGAAGG CATGACAGGG
CTGTTGGAGC AGGCACTCCG CCGGGTCTGC GGCAAGGACG GCGAACCGGT CATTCAGCTT
AAGACCGCGT TTGGTGGCGG CAAAACCCAC AGTATGCTTG CGCTCTACCA TATGATGCGC
GGCAGGGTCT CCGTGGACAA GATCCCGAAC GTGAAGTCTG TTCTGCAGCG GGCAGGCGTA
TCGTCCCTTC CGAAAGCGAA TGTGGCGGTT CTGGTCGGTA CGGCTCTCGA CCCGACCAAG
AGCAAACGCC CGAATAATAT GCCCGGCATC ACCATCAACA CCCTTTGGGG CGAGATGGGG
GCGCAGCTTG CCGAATCATC CGGTAACGCA AAGCTGTACG ACTACGTGAA AGAAGCGGAC
AAAAAAGGCG TTTCCCCCGG TTCGGAAGCG CTGAAGAACC TATTCGACGC TGCTGCTCCT
TGCCTTATCC TCATGGACGA GTTGGTTGCC TACGCCAAGA AGATATACGG CGCAAACGGT
CTGCCTGCAG GTACATTTGA TAACTTTATC TCCTTCATTC AGGAAGTGAC CGAAGCAGCA
CGGGCGAGCA AGAACAGCCT TGTGGTGGCG TCTATTCCTG AATCGGATAT TGAAATTGGC
GGTGAGGCGG GCAAGATTGC TCTCGAAACC ATCGAGCATA CCTTTGGGCG CATGGAGTCC
ATCTGGAAAC CCGTCGCAGC GAACGAGGGC TTTGAAGTCG TGCGCCGCAG GCTGTTCCTT
GACTGCAAGA ACCCGGACGG ACGTGATGCC GTCTGTGCTA AGTTCAGCCA AATGTACAGC
GAAAACACCA GCGATTTTCC CCTTGAATCC CGAGAAGTAG AATACAGGGA ACGCATGATT
TCCTGCTATC CCATCCACCC GGAAGTATTC GACAGGCTCT ATGAGGACTG GGCGACTTTA
GAGCGTTTCC AGAGGACGCG CGGTGTTCTG CGCCTGATGG CGGCGGTCAT CCATGAACTT
TGGATGGGCA ATGACGCAAG CCTAATGATT ATGCCCGGCT CTATCCCCCT TGACGTGCCG
AACGTCCGCG ACGAGCTGAC ACGTCATCTG TCCGAAGGCT GGAACGCCCT GGTCGACCGC
GAAGTGGACG GCAAGAATTC CATCCCTTAT TTAAAAGACC AGTCCAATCA GCGGTACGGC
AGAAAGCTAG CTTCCCGCCG TGTGGCCAGG ACGGTTATGC TGGGCAGTGC ACCCACATCC
CGTAATCAGA ATGTGCGTGG CATCGAGGCT TCTCGCATTC GGCTCGGCGT CATTCAGCCC
GGCGAAAACA TCGCTGACTT CAACGATGCA CTGAACACAC TGACATCAGC CCTGGCCTAC
CTTTATACGA ACCCCTCCGG CGACCGTTTC TGGTATGATA CGCGACCGAC GCTCCGCAAG
ACCGTGGAAG ATCGTGCCAC ACAGGTGGCT GCTTCCGATG TGGAATATGA AATTGAGACA
AGGCTTCGTT CTCTTCGCAA AGAGCAGCCG TTCGGGGGCA TTCATATTTA CCAGTCGTCA
TCGCTTGACG TGCCGGACGA CCAGACCACG CGGCTTGTTA TCTTGCGTCC CGTGGACGAA
TACAAGGCGG CGAACCCGAA CAACACAGCA ATGACGGCGG TCACGGATAT TCTGAACAAC
CGTGGCAATA CGCCGCGCAT CTATCGGAAT ATGCTCGCCT TCATCGCTCC TGACCAAGAC
CTGATGTCGT CACTGAAACA GGCGGTTCGG CTTTATATTG CCTGGAAGTC CATCAAGGAT
GACAGCGAAG ACTTGAACCT CGACGCAGCG CAGAACCGTG AAACGGACAA CAACCTGCGC
CGCAGCAATG AAACCGTGGA TGCGCGTATC AAGGAAGCCT ACTGCTGGCT GCTTGTGCCG
TACATCGACA AGAACGCCGA CATGAAGACC ATTGTCTGGG ACACCATCCG CATCAGCGGC
GGCAATGAAG GCATCATCAC CAAAGCCGCC AAGAAGATGC TCCAAAACGA GGCAATCATC
ACACAGTGGG CACCGGCTCT GCTCCTTATG GAACTTGATA ATGTGCTATG GAAGGACGCC
GATAACATCC CCATCAAAAA GTTGTGGGAG TACCTCTGTA CCTATTGCTA TCTGCCGCGT
TTGGCGAATG ACACCGTTCT CGATAGGGCA ATCCAGACCG GCTTGAACTC GCCTGAGTAT
TTTGCCTTTG CTTCCGGCTT CGATGGCACA CGTTACATAG ATTTGAAGTT CAACCAATAT
GTCGGTATGA TAGAGCGTTC CGGTTATTTG GTGAAAGTCA GCGTCGCCCA GAAACAGTTA
GCCGATGAAG AAGCAAAACG GCAAGCGGAG GCGGCGGCTC GTGCAGCACA GTTGGGTGGC
GGTGCGAGCA TTCCCATAAG CGTGGACGGC GGCACTTCAA CGACCACGAC TTACCCAGTG
GGCGGTGGAG TTCCCGCTGG CTCTCACGAA GTTTACGAAG ACCAGACCCC TGCCGCACCG
AAAAATAAAC GGTTCTTTAT GTCTGCCGAC CTTGACACCA CGCGGATTAA CCGCGATGTG
CAGAAGTACG TCGAGGAGAT AATCCAGCAC CTGACTTCTG TTGACGGCGC AAGGGTCAGG
GTATCCCTTG AAGTAGAAGC TGAAACCGCA GACAGCTTCA CTCAGCAGAC AGTGAGAACA
ATCTCCGAAA ACTGCCGGAC ATTGCGAGTG CGGGATTCGG GGTTTGAAGA GTAG
|
|---|
| Protein sequence | MENNHVQVSQ GFRILLGAFA PYIARELSNE FGKDWWNVAV LDTLYDDQKR DLPYSGDWAK
LVDSLDIARC LLLFDLHWQR VLRKKLSIDH RTWAKELVGV RNKLAHLGGE DFSSDDTWRA
LDTMSRLADQ IDPESAEEIR GLLRTSRYGS ADGSTTVTEV LAAPAPGKQK NAGILNTTPI
SGLPSWRDII EPHPDVAQGR YKNAEFAADL AQVARGEGAF EYRDPVEFFA RTYVTEGMTG
LLEQALRRVC GKDGEPVIQL KTAFGGGKTH SMLALYHMMR GRVSVDKIPN VKSVLQRAGV
SSLPKANVAV LVGTALDPTK SKRPNNMPGI TINTLWGEMG AQLAESSGNA KLYDYVKEAD
KKGVSPGSEA LKNLFDAAAP CLILMDELVA YAKKIYGANG LPAGTFDNFI SFIQEVTEAA
RASKNSLVVA SIPESDIEIG GEAGKIALET IEHTFGRMES IWKPVAANEG FEVVRRRLFL
DCKNPDGRDA VCAKFSQMYS ENTSDFPLES REVEYRERMI SCYPIHPEVF DRLYEDWATL
ERFQRTRGVL RLMAAVIHEL WMGNDASLMI MPGSIPLDVP NVRDELTRHL SEGWNALVDR
EVDGKNSIPY LKDQSNQRYG RKLASRRVAR TVMLGSAPTS RNQNVRGIEA SRIRLGVIQP
GENIADFNDA LNTLTSALAY LYTNPSGDRF WYDTRPTLRK TVEDRATQVA ASDVEYEIET
RLRSLRKEQP FGGIHIYQSS SLDVPDDQTT RLVILRPVDE YKAANPNNTA MTAVTDILNN
RGNTPRIYRN MLAFIAPDQD LMSSLKQAVR LYIAWKSIKD DSEDLNLDAA QNRETDNNLR
RSNETVDARI KEAYCWLLVP YIDKNADMKT IVWDTIRISG GNEGIITKAA KKMLQNEAII
TQWAPALLLM ELDNVLWKDA DNIPIKKLWE YLCTYCYLPR LANDTVLDRA IQTGLNSPEY
FAFASGFDGT RYIDLKFNQY VGMIERSGYL VKVSVAQKQL ADEEAKRQAE AAARAAQLGG
GASIPISVDG GTSTTTTYPV GGGVPAGSHE VYEDQTPAAP KNKRFFMSAD LDTTRINRDV
QKYVEEIIQH LTSVDGARVR VSLEVEAETA DSFTQQTVRT ISENCRTLRV RDSGFEE
|
|---|
| |