| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0586 |
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| Symbol | |
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| ID | 7257553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 647625 |
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| End bp | 649445 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643560504 |
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| Product | Collagen triple helix repeat protein |
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| Protein accession | YP_002457088 |
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| Protein GI | 219666653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTAT TAACCACGGG ATTGATTGAA AACTCACCCG TCTCCGGAAT AAGAGCAACT
ACTGTGCTTT CTGTCAGAGT AGTGAATGAT GATTCCGCAT CTGCTTCTGT GCAAATATCT
GGATCTTATG TATCTGGAAC CACTACTACG GCGTATGTTT TGGAGGTATT CATTCTGGAA
CCTGGAGAGG TGGCAACACG AAGCTACTCA GCCAATTTTG ATGCGTTTCA GTTTCAATTT
ACCACCAGTT TGGAAAATGT TGAGATTTCG GCTTGGGGAA AAGATAACGA GGGAAATTTG
ATCGCAGCTC ATCGTGTGCT GCCTGCAGAG CTTGATCCCT TAGATCAGAA TGGAGGGGCA
GGGCCAACAG GAGCCACGGG TGCGACAGGT CCAGCAGGGC CAACAGGAGC CACGGGTGCG
ACAGGTCCAG CAGGAGAAAC AGGAGCCACG GGTGCGACAG GTCCAGCAGG AGAAACAGGA
GCCACGGGTG CGACAGGTCC AGCAGGAGAA ACAGGAGCCA CCGGTGCGAC AGGCCCGGCA
GGAGAAACAG GAGCGACCGG TGCCACAGGT CCAGCGGGAG AAACGGGAGT AACCGGCGCG
ACAGGCCCGG CAGGAGAAAC AGGAGCGACC GGTGCCACAG GTCCAGCAGG AGAAACAGGA
GCAACAGGCG CGACTGGCCC CGCCGGAGAA ACAGGAGCGA CCGGTGCCAC AGGTCCAGCG
GGAGAAACGG GAGTAACCGG CGCGACAGGC CCGGCAGGAG AAACAGGAGC GACCGGTGCG
ACGGGTCCAG CAGGAGAAAC AGGAGCGACC GGTGCGACGG GTCCAGCAGG AGAAACAGGA
GCGACCGGTG CGACAGGTCC AGCAGGAGAA ACAGGAGCGA CCGGTGCGAC AGGTCCAGCA
GGAGAAACAG GAGCAACAGG CGCGACTGGC CCCGCCGGAG AACCTGGCGG TCCTACCGGT
CCTACTGGCG CAACGGGTGC AACTGGACCT GCGGGAGAAT CCGGTGGTCC TACGGGGCCG
ACTGGCGAAA CCGGGCCGAC AGGTGCAACA GGCGAAACTG GCCCTACCGG ACCGACCGGA
GCAACCGGTG AAACCGGTGC TACCGGCACA TTCGAGCCTA ATCCATTTGC AGTCTATGTG
CAAGCTGGGG CAGTCGGTGG GGACGGCACA CAGGCCAGTC CATTTGAAAC GATACAACAG
GGCGTCACAG CAGTATCACC GACAGGAACC GTTCATATTC TGGGCGGGAC TTATCCGATT
ACAGCGACAA TATCGGTGAA TAAAGCAGGA GTAACCCTGA AAGGGTACCC TAATACGCTG
ATTGAACTTC AGGCCGCGGT AATTCCTTTC GCTGTCACGG GTAGTGGAGT GACCATAGAT
GGCTTGACGA TCACCAGCGA TAATCCGTAT GCGGTTCCAT TTATTCAGCT TGGAGGAAGC
AATCATAAGC TTATAAACAA CTATTTTTAT GGACCGCCTC AAGCGGGGCC GTCAGATACC
TGGGTTGTAA ATCGCGGATT CGTGACGCAA GCAAATAATA TGCAGAATTT GACGGTTCAA
AATAATATTT TCTATTTTCT GAGACAGCCG GCTTATTTGA ATCCCAATAC GACAGGGTAT
ATCATCGATA ATGTGGTGTA TAATACCCGT GGATTTGTTG TGGACAGAGC AGTTGTCGTT
TTATCGGGTA ACTCATGGGG CAGCCCGGAA AATGCAGTGG ATATAGCCTT GCTGGTTGGT
ACGATCGCCG GTCCTCCTTA TGATCCCTTA GCTGACCTGG CTGCGAACAA CAGCGATGCC
AGTATCAGTG ACCAAAGATA G
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| Protein sequence | MALLTTGLIE NSPVSGIRAT TVLSVRVVND DSASASVQIS GSYVSGTTTT AYVLEVFILE
PGEVATRSYS ANFDAFQFQF TTSLENVEIS AWGKDNEGNL IAAHRVLPAE LDPLDQNGGA
GPTGATGATG PAGPTGATGA TGPAGETGAT GATGPAGETG ATGATGPAGE TGATGATGPA
GETGATGATG PAGETGVTGA TGPAGETGAT GATGPAGETG ATGATGPAGE TGATGATGPA
GETGVTGATG PAGETGATGA TGPAGETGAT GATGPAGETG ATGATGPAGE TGATGATGPA
GETGATGATG PAGEPGGPTG PTGATGATGP AGESGGPTGP TGETGPTGAT GETGPTGPTG
ATGETGATGT FEPNPFAVYV QAGAVGGDGT QASPFETIQQ GVTAVSPTGT VHILGGTYPI
TATISVNKAG VTLKGYPNTL IELQAAVIPF AVTGSGVTID GLTITSDNPY AVPFIQLGGS
NHKLINNYFY GPPQAGPSDT WVVNRGFVTQ ANNMQNLTVQ NNIFYFLRQP AYLNPNTTGY
IIDNVVYNTR GFVVDRAVVV LSGNSWGSPE NAVDIALLVG TIAGPPYDPL ADLAANNSDA
SISDQR
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