| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0461 |
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| Symbol | |
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| ID | 7257428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 494725 |
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| End bp | 495426 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643560380 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002456964 |
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| Protein GI | 219666529 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCACGA TACCAATTGT CTATGAAGAT AATCATTTAC TGGTCGTTGA TAAACCACCC
AATATCCTAT CCCAAAAAGA CAGTACCGGG GATATGGATA TACTTACCTT ACTCAAGCAG
GATATCAAAA TACGCTACAA TAAACCCGGC AATGTCTATT TAGGCCTGGT TCATCGCCTG
GACCGGCCTG TAGGCGGAGT CATGGTTTTT GCCAAAACTT CCAAATCGGC AGCGAGACTT
TCCGAGCAGA TCAGAAATCG GGAGTTTACC AAAACCTATT TAGCACTTAT CCAGGGGCAG
CCGGCGAAGC AAAAAAACAC CTTAATCCAC TATTTAGTCA AGGACGAAAA GTCAAATAAG
GTATCCGCAG TGAAGAAAGG CGCTAAAGGG GCCAAAGAGG CTATTCTGGA CTATGAAGTG
GTGCATAGTC AGTCTGATCT CAGCCTGGTA AAAGTCAATT TGCGTACAGG CAGACCGCAT
CAAATCCGTG TGCAGTTTGC CCATCTGGGC CATCCTCTTT ATGGAGATTA TAAATACGGC
AAGATAGTAA AGACTTCTAA AACATCCCTG ACGAAACCGC ACCTTGGCCT TTGGTCTTAT
GAGATTTCTT GTCTGCATCC CATATCCAAG GGTCAAATAC ATTTTAAGAG TTATCCCCAT
CAACACAAGC CTTGGAATCA ATTTGACCTG GGTTTGCCAT GA
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| Protein sequence | MFTIPIVYED NHLLVVDKPP NILSQKDSTG DMDILTLLKQ DIKIRYNKPG NVYLGLVHRL
DRPVGGVMVF AKTSKSAARL SEQIRNREFT KTYLALIQGQ PAKQKNTLIH YLVKDEKSNK
VSAVKKGAKG AKEAILDYEV VHSQSDLSLV KVNLRTGRPH QIRVQFAHLG HPLYGDYKYG
KIVKTSKTSL TKPHLGLWSY EISCLHPISK GQIHFKSYPH QHKPWNQFDL GLP
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