Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0423 |
Symbol | rplD |
ID | 7257390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 470325 |
End bp | 470948 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643560342 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_002456926 |
Protein GI | 219666491 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000203712 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAGG TTCAAGTAGT TAATATGCAA GGTTCTCCCG TTGGAGAGCT GGAGCTGGAT GAATATGTGT TCGGTATTGA ACCCAATACC CATGTTATGC ACCAGGCAGT AGTAGGACAA CTGGCCAGCC AAAGACGTGG TACTCACTCC ACCTTACTCC GTGGAGAAGT TCGCGGAGGC GGCCGCAAGC CCTGGCGTCA AAAAGGTACC GGCCGGGCTC GCGCAGGCAG CATTCGTTCA CCTCTATGGA GAGGCGGCGC TGTGCTTTTC GGACCCAAGC CCCGCAAATA TGGCTTCAGC CTTCCTAAGA AGGTTCGCCG CCTGGCTTTG CGTTCAGCCC TTTCTTCCAA GGTAAACGAA CAAAAACTGA TCGTATTGGA AGATTTGAGC TTGAACGAAG CAAAAACCCG GGAAATGGTT AAAGTTCTGC AGGCCCTGAA TGTCGGCAAA AAAGCTTTAA TCGTTACAGA TGAATTTATG GAAACCATCG ATCGTTCTGC CCGCAATATT GCTGGGATCA AAACCACTGC AGTAGAAGGC ATGAATATTT ACGATCTTCT CAATTCTGAT GTCATCGTCA TGACCAAAGC AGCGGTAACG AAAACGGAGG AGGTGTTAGC GTAA
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Protein sequence | MPKVQVVNMQ GSPVGELELD EYVFGIEPNT HVMHQAVVGQ LASQRRGTHS TLLRGEVRGG GRKPWRQKGT GRARAGSIRS PLWRGGAVLF GPKPRKYGFS LPKKVRRLAL RSALSSKVNE QKLIVLEDLS LNEAKTREMV KVLQALNVGK KALIVTDEFM ETIDRSARNI AGIKTTAVEG MNIYDLLNSD VIVMTKAAVT KTEEVLA
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