| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0413 |
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| Symbol | |
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| ID | 7257380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 455487 |
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| End bp | 456680 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643560332 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_002456916 |
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| Protein GI | 219666481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000029399 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCTT TTCTGGCGAG ACAGCCTATT TTTGACAGAG GCCTGAAAAT CTACGGCTAT
GAACTTTTGT ACAGACAGAG CCGTGATAAT TTTTTCTCCG GCATTGACGA CGACCAGGCC
ACCGCCGAAT TAATTTACAA CACCTTTCTT GTCATGGGAC TCCAGGATTT GACTGATGGC
AGCAATGCCT TTATCAATTT CTCAAAAAAG CTGATTGACA GTGATATTCC TTTCTTGCTG
CCCAAGGAAA ATATTGTGGT GGAAATTCTG GAACGGGACC AAGTCACTCC GGCTACGGTA
GAGGCCTGCA AAAAGATGAA GGCTATGGGC TATAAGCTGG CTCTCGATGA TTTTGTAGCC
GATCAAAACA ATCTGCCTTT AATCGAAATG GCTGATATTA TTAAGATAGA ATTTCCGGCT
GTCAGTAAAA ATGAACAATC CAGCCTGATG AAACGCTGCG GTAAAAATGT AAAGTTTTTA
GCCGAGAAGA TTGAAACCAG GGAAGAGTTC AGACAAGCGG CGGCTATGGG CTATGACCTG
TTTCAGGGGT ACTTTTTCAG TAAGCCCGCC ATAATCCAGT CCAAAGAGGT GGTAACCCTT
AACGTCAACC TTTTTAGTGT TCTTGAAGAG CTGAATTCAG CGGAGCCCAG TTATGGAGTT
ATGGCCAATA TTATAAAAAG TGATTTAGGG CTTTCCTATA AACTATTGAA GTTGGCTAAT
TCGGTGTATA TGGGTTCAAA AAATAAGATT CAGTCCATTC CTCACGCGTT ATCCTTTATC
GGGATTAAAG AAATGCATCA ATGGATTGCC CTGATGCTGT TAAAGGATAT GCAGAATGTT
GAAAATGCCG AATTGATTAA GCAGTCCCTG ATCCGAGGAA AATTCATGGA ACTCCTTGCC
TCAGAACTTT ACCCTCAGAG TGAAAGTTCC GGTTTTTTCT TCACAGGGAT CTTCTCTGCC
ATTGATGTAT TGCTCAACAG TCCGATGGAA CAGGTGTTAA AGGGGCTTCC CCTATCCATA
CAGGTTAAAC AGGCCTTGCT GGGGGCCGAA AATGAGCAAC GGCAACTGTT GAATTTTGTG
ACGGCTTGGG AAAAAGGTCA CTGGGAAAAA GCTGCGGATC GGTATACCAT GTCGCGAAAG
TTTATGGAGC TGTATTTTGA AGCCTTGAAA TGGACACAAA AACTGAATTA CTGA
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| Protein sequence | MDAFLARQPI FDRGLKIYGY ELLYRQSRDN FFSGIDDDQA TAELIYNTFL VMGLQDLTDG
SNAFINFSKK LIDSDIPFLL PKENIVVEIL ERDQVTPATV EACKKMKAMG YKLALDDFVA
DQNNLPLIEM ADIIKIEFPA VSKNEQSSLM KRCGKNVKFL AEKIETREEF RQAAAMGYDL
FQGYFFSKPA IIQSKEVVTL NVNLFSVLEE LNSAEPSYGV MANIIKSDLG LSYKLLKLAN
SVYMGSKNKI QSIPHALSFI GIKEMHQWIA LMLLKDMQNV ENAELIKQSL IRGKFMELLA
SELYPQSESS GFFFTGIFSA IDVLLNSPME QVLKGLPLSI QVKQALLGAE NEQRQLLNFV
TAWEKGHWEK AADRYTMSRK FMELYFEALK WTQKLNY
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