Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0343 |
Symbol | |
ID | 7257308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 380790 |
End bp | 381911 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643560260 |
Product | periplasmic binding protein |
Protein accession | YP_002456846 |
Protein GI | 219666411 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT GGTTGCTATT TTTGATGATT CCGCTTCTTA TTCTGACAGG ATGCGCAAGT CAGGTATCTC AGAATCCCGG TCAGGAAGAC GGCGGTAAAG AGAATAGTGC AGAGAAAAGT ACACAGGTGA TTGCCGATAT GATGGGAAGA GAAGTGGAGG TGCCGACAAA GATAAACTCC ATCATCTGTA CCGGTGCCGG TGCTCTGCGG CTGATCGCTT ATGCCCAGGC CACGGATCTC GTGATTGGCA TTGAAGATAC CGACAAGAGC GGAGTGATAG GGCGGCCTTA TAACTATGTT TATCATGATC AGTTCAAAGA CCTCCCCAGT ATCGGCAAGG GCGGCGGCCG AGGCTATACC GCCTATGAAG AGCAGATAAT CGCCCTGCAG CCGGATGTCA TTTTCTGTAG TTATACCAGT GACGCTCTTG ACCAGCTTGC CGCCAAGACA GGTATTCCTG TAGTATCTAC CGCTATTCAG GGCAATTTAT TTGAAGAAAA TACCGTTGAA TCCCTGAAAT TAATAGGTGA AATATTGGGG AAAGAAGAAC GCTGTGCTGA GGTGATTGCT TATCTGGGCC AATATGAGGC CGACCTCAAT AACCGTACTA AGGATATTCC GGAGGCAGAC AAACCGACGG TGTATGCCGG GGCTATATCC AATCAGGGGG GCCGGGGATT TGCCGGAACC TACGGTGGCT TGGGCCCCCT TAAAGCGATT AATGTCAGTG GTGTCATGGA TGAGGTAGGA AAGAAAGAAG GCTTTGAAGT GGATTGGGAA CAGATTCAGG TCTGGGATCC TGATGTTATC TTCCTTGACC CCGGCAATAT AAGTCTGGTC AATGAAGAAT ATGCAAAGAA GCCCGATTAT TTCAATTCTC TGCGCGCGGT GACAGAAGAA AATGTTTACT CGATCATCAG CTTTAATAAT TATACGACCA ATATTGAAAC GGCAATTGCC GATGCCTACT ATGCGGGTAA GGTACTGTTC CCCGAGAAGT TTGCCGACAT TGATATGGAG GCTAAAGTGG ATGAGATCTA TAAAAAGTTC TTAGGAAAGG GGATCTATGC CGATATGAAG GAGGCTGGAT TATCCTTTGG AAAGATTACA CTTGGTCAAT AA
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Protein sequence | MKKWLLFLMI PLLILTGCAS QVSQNPGQED GGKENSAEKS TQVIADMMGR EVEVPTKINS IICTGAGALR LIAYAQATDL VIGIEDTDKS GVIGRPYNYV YHDQFKDLPS IGKGGGRGYT AYEEQIIALQ PDVIFCSYTS DALDQLAAKT GIPVVSTAIQ GNLFEENTVE SLKLIGEILG KEERCAEVIA YLGQYEADLN NRTKDIPEAD KPTVYAGAIS NQGGRGFAGT YGGLGPLKAI NVSGVMDEVG KKEGFEVDWE QIQVWDPDVI FLDPGNISLV NEEYAKKPDY FNSLRAVTEE NVYSIISFNN YTTNIETAIA DAYYAGKVLF PEKFADIDME AKVDEIYKKF LGKGIYADMK EAGLSFGKIT LGQ
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