Gene Dhaf_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0209 
Symbol 
ID7257170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp228787 
End bp230685 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content49% 
IMG OID643560123 
ProductNitrous-oxide reductase 
Protein accessionYP_002456713 
Protein GI219666278 
COG category[C] Energy production and conversion 
COG ID[COG4263] Nitrous oxide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAG GACTGTTTAA GAAGATTGTA TTGTCCCTGG CAGGGCTGCT GGTTGGCCTG 
GTCATAGCTG TTTACTTATC CGCCCAGCTT AATCCCGAGG CGGAGGCGGC TGCTGCCTTC
GGCGGGAAAA ATATATCTGT GGACGGAGTG CCTGACGATG TGGTGCAGGC GGCTCTGAAA
ACCTATGTGC CACCCGGTCA GCTGGATGAG TATTATATGT TTGCCTCAGG GGGCCATTCC
GGTAATGTCT TCGTCTATGG TGTGCCATCC ATGCGGCGGA TTAGAACAAT TCCGGTATTT
ACCCCCGAGT CCGCCGTGGG GTATGGCTGG ACGACGGAAT CCAAGGAAAT GCTTGGCGAA
TGGAGCTGGG GGGATGTCCA TCATCCTGCT TTGAGCGAGA CCAAGGGAGA TTATGACGGG
CGCTGGCTTT TTGTCAATGA TAATGCCAAC AGCAGGGCCG CCCGGATCGA TCTGGATTCC
TTCAGGACTA GTCAAATTTT GGATATTCCT AATATTTATG GACCCCACAG CGCTGTATTT
ATGACACCTA ACTCCGAATA CTTTATGCTG GGGTCCCGCT TTGCCGGACC GATACCCTAT
GGGACCTATT CTCCCATTGA GAATTTATCA AAAGATTATA ATTGTGTTTT AGCAGCAGTA
GCTATCGACC CCAATAATGG TGAGATGAGC GTGGGGTGGG AAGTGCTGAT GCCCCCCTGG
TCCTTCGATT TATCGGATGC CGGTAAGCTG GACAGTGAGG GCTGGGCCTT TCTGACGACC
TATAATACTG AGGAGGCCTA TGAGCTGCTG GAGGTCAATG CCTCCCAGCG GGAAATGGAT
TATGTGGTCG CTTTAAATTG GAAAATGCTT GAACAGGCGG CCAATGAAGG AAAATACAAA
ATAGTTGATG GCGTCAAAAT GATTGATCCC CTGGATGTAC CGGGCTCCGT CTACTTGGTC
CCGGCTATGA AGAGCCCCCA TGGTGTGGAT GTCACACCGG ATGGAAAGTA TTTTATTGCT
AACGGAAAAG TGGCTCCGGT AGCTACCGTA TTCAGCTTTG AGAAATTCAA GGAATGCATT
GACAACAAAG ACTTCCAGGG CGAGGAACGA GGTTTCCCGG TTGTCAATTA CGAGAAAGTA
AGAGTGGCGG AAGTGCCGGT GGGCTTAGGA CCATTGCATA CTCAATTTGA CGGCAACGGT
TATGCCTATA CCACCTTATT CATCGACAGT ACTATTGCCA AATGGAGTCT GGACACCTTT
GAGGTTGTCG ACGTTACTCC GGTACATTAT TGCCCGGGTC ATCTGTGTGC TGCTGAGGGA
GACACTGTCT CTCCGGACGG CAAGTATCTG GTCTCCTTAA ATAAGCTGGC CAAGGATAAG
TTCTTGTCCG TTGGGCCATC CCATCCCGAA AGCGCCCAGC TGATTGATTT AACCACGGAT
AAGATGAAAA TCTTAATGGA TGTTCCCACA GATCCTGAGC CTCACTTCGC TCAGATGATT
AAAGCCGATA AGATTACGAC CTGGGAAGTT TTTGAGAAGG ATCCCAGTCA GCCGGGTGCT
GTCTATGAGA AAGAAAATGC CCGCATTGAA CGGGATGGCA ACAATGTCAC AGTCTATCAA
ATGGGCTTCC GCAGCCGCTA TTACCCGGAT CATGTGGAGG TCAATGAAGG GGATCATGTG
ACCTGGTATT TAACCAATAC GGATTTCGAT GAGGATATCA CCCATGGCTT TGGTATTTGT
CTGTATGACC TTAATGCGGA AGCACAACCG GGTGAGACGA TAAAATTTGA ATTTGTCGCC
GATAAAGCGG GAGTCTATCC TTTCTATTGC ACCAACTTCT GCTCGGCCCT CCATCAGGAA
ATGCAGGGCT GGTTTATTGT CAAACCAAAA GGCCTATAA
 
Protein sequence
MEKGLFKKIV LSLAGLLVGL VIAVYLSAQL NPEAEAAAAF GGKNISVDGV PDDVVQAALK 
TYVPPGQLDE YYMFASGGHS GNVFVYGVPS MRRIRTIPVF TPESAVGYGW TTESKEMLGE
WSWGDVHHPA LSETKGDYDG RWLFVNDNAN SRAARIDLDS FRTSQILDIP NIYGPHSAVF
MTPNSEYFML GSRFAGPIPY GTYSPIENLS KDYNCVLAAV AIDPNNGEMS VGWEVLMPPW
SFDLSDAGKL DSEGWAFLTT YNTEEAYELL EVNASQREMD YVVALNWKML EQAANEGKYK
IVDGVKMIDP LDVPGSVYLV PAMKSPHGVD VTPDGKYFIA NGKVAPVATV FSFEKFKECI
DNKDFQGEER GFPVVNYEKV RVAEVPVGLG PLHTQFDGNG YAYTTLFIDS TIAKWSLDTF
EVVDVTPVHY CPGHLCAAEG DTVSPDGKYL VSLNKLAKDK FLSVGPSHPE SAQLIDLTTD
KMKILMDVPT DPEPHFAQMI KADKITTWEV FEKDPSQPGA VYEKENARIE RDGNNVTVYQ
MGFRSRYYPD HVEVNEGDHV TWYLTNTDFD EDITHGFGIC LYDLNAEAQP GETIKFEFVA
DKAGVYPFYC TNFCSALHQE MQGWFIVKPK GL