Gene Dhaf_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0115 
Symbol 
ID7257064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp121953 
End bp122777 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID643560018 
Productnitroreductase 
Protein accessionYP_002456620 
Protein GI219666185 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00205311 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAAT TTCAGTCACG GATAGGCAAA GATGGCCGTC TGACAGTAAT GGAAATACCG 
TTTGACGCAA GAGAAACTTT TCAAATGCCA AAGGGTACGA TTTTTGTATG CGGAACCATC
AATGGAATAC CCTATCGGGG AAAACTGCTG TCAAGGGGAA ATGGCAAGCA GGTACTGACC
ATAGACAAGA CCTTGCAAAA GGGGTTGGGC TATGCCGGTC AGGATTTTCC TGTTAACGTT
GCCATGGCCT GTGAGAATCA GGCAGAGATG GTTGATGAAG AAAAGGAAGC GATTCCCCGG
CTTCACTCCG ATATGGAAGC GATCACTGCC ATAGCGGGAC GAGCAAGTGT CAGAAAATAT
ATGGATAAAA CAGTAGAACC GCAAAAGCTG GAGGTGATTC TCCGTGCCGG GCTAAGTGCA
CCTTCGGCAA AGAATAAGCG TCCATTCCAC TTCGTTGTGG TCGAGGACAA AGCTGTCCTT
GGTGCATGGG CAGCAGGCAA TTCGAACGCA AAGATGCTCA GCCATGCTCC TTGTTGCATT
GTTGTATGTG GTGACGGCAA TGTTGAAGGA ACTCGTGATT TCTTGGTGGG AGGCTGCGCC
GCGGCCACGC AGAACATGCT GATTGCCATT CACGCTCTTG GGCTTGGCGG CGTGTGGTGC
GGTGTGCTTC GCGGGAAGGA ATGGAGCAGG CAGGTTGCGG CCGACCTGTA TCTGCCTGTA
AAGGTAGAAC CACTCGCCGT CATTGCGTTG GGCTATCCCA CGGAACAGGA GAAAGCACCT
GTCCCGTGGG ATATGAAGTC CCATATTCAT TATGAACGTT GGTAG
 
Protein sequence
MVEFQSRIGK DGRLTVMEIP FDARETFQMP KGTIFVCGTI NGIPYRGKLL SRGNGKQVLT 
IDKTLQKGLG YAGQDFPVNV AMACENQAEM VDEEKEAIPR LHSDMEAITA IAGRASVRKY
MDKTVEPQKL EVILRAGLSA PSAKNKRPFH FVVVEDKAVL GAWAAGNSNA KMLSHAPCCI
VVCGDGNVEG TRDFLVGGCA AATQNMLIAI HALGLGGVWC GVLRGKEWSR QVAADLYLPV
KVEPLAVIAL GYPTEQEKAP VPWDMKSHIH YERW