Gene DvMF_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3175 
Symbol 
ID7175121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp4004729 
End bp4005223 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID643541711 
ProductRubrerythrin 
Protein accessionYP_002437579 
Protein GI218888258 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.738943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCCACGAGAA CATGATGGCG GCCTTTGCCG GTGAATCCCA GGCCAACCGC 
AAGTACCTTG CCTTCGCCAA GCAGGCGGAC AAGGAAGGCC TGCCCCAGGT CGCCAAGCTG
TTCCGCGCCG CCGCCGAGGC GGAAACCATT CACGCCCACG GCCACCTGCG CAACGCGGGC
AAGATCGGTT CCACCCTCGA CAACCTGAAG GCCGCCATCG ACGGCGAAAC CTACGAATTC
ACCAAGATGT ACCCGCAGAT GATCGCCGAG GCCGAAGCCG AAGGCGAAAA GGTGCCCGCG
CGCTACTTCG GCTGGGCCAA CGCCGTTGAA GAGGTGCACG CCAACCTCTA CAAGAAGGCG
CTGGAAAACC CCTCCGCCCT GGCCGACGTG GACTACTACG TGTGTTCCGT GTGCGGCTAC
ACCCATGAAG GCCCGCACGA CAACAAGTGC CCCATCTGCA ACGCCGCGGC GTCCGCGTTC
TACAAGGTCG CCTAG
 
Protein sequence
MSKTHENMMA AFAGESQANR KYLAFAKQAD KEGLPQVAKL FRAAAEAETI HAHGHLRNAG 
KIGSTLDNLK AAIDGETYEF TKMYPQMIAE AEAEGEKVPA RYFGWANAVE EVHANLYKKA
LENPSALADV DYYVCSVCGY THEGPHDNKC PICNAAASAF YKVA