Gene DvMF_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3160 
Symbolndk 
ID7175106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3986241 
End bp3986660 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID643541696 
Productnucleoside diphosphate kinase 
Protein accessionYP_002437564 
Protein GI218888243 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.00622384 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCGAGC GCACCTTTTC GATCATCAAG CCCGACGCCG TGGAACGCAA CCTGTCCGGC 
GCCATCCTGA AGATGATTCA GGACAGCGGG CTGAAGGTCG TCGCCATGAA GATGATCCAC
CTCACCCGCA GCCAGGCCGA AGGCTTCTAC GCCGTGCACC GCGAGCGTCC CTTCTTTGAC
AGCCTGGTCA CCTACATGTG CTCCGGCCCG GTGGTCTGCT CCGTGCTCGA AGGCGACAAC
GCCATCCAGC GCTACCGCGA CCTGATGGGC GCCACCAACC CGGCCAACGC GGCCGAAGGC
ACCATCCGCA AGACCTATGC CGTCAGCATC GAGGCCAATT CCGTGCACGG TTCCGACGCG
CCCGAAACGG CTGCGTACGA AATCGCGTAC TTCTTCAACG CTCTGGAGAT GGTAGGGTAG
 
Protein sequence
MAERTFSIIK PDAVERNLSG AILKMIQDSG LKVVAMKMIH LTRSQAEGFY AVHRERPFFD 
SLVTYMCSGP VVCSVLEGDN AIQRYRDLMG ATNPANAAEG TIRKTYAVSI EANSVHGSDA
PETAAYEIAY FFNALEMVG