Gene DvMF_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3156 
Symbol 
ID7175102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3980666 
End bp3981337 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID643541692 
ProductHhH-GPD family protein 
Protein accessionYP_002437560 
Protein GI218888239 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.0734145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGGA AACGGGAACG CCTGCTGCGC GAGATGTATG CGGCCATGCA CGCCCGGCTG 
GGGCCGAGCG GCTGGTGGCC GGGCGAGACG CCGCTGGAAA TCTGCGTGGG CGCGGTGCTG 
ACGCAGAACA CCGCGTGGAC CAACGTGGAA AAGGCCATCT GCCGCCTGCG GGACGCGGGC 
GCGTTGGCCA GCGGCCAGAC ACTGCTGTCC CTGCCCGAGG CGGAACTGTC CGAACTGATC 
CGCCCCGCGG GCTTCTTTCG GCTGAAGGCG GTGCGCCTGC GCAACCTGCT GCGCTTCCTG 
GACGATGCCT GCGGCTTCGA CTTCGGCGTG CTGGCCGGTC AGGACCTTGA CGACCTGCGC 
CCCCGGCTGC TCAAGGTGTC GGGCGTCGGA CCGGAAACGG CGGATTCCGT GCTGCTGTAC 
GCCGTGGGGC TGCCCACCTT CGTGGTGGAT GCCTACACCC GGCGCATCCT GCACCGGCAC 
GGCATGGTGC CGGACGACAT CCCCTACCAC GAACTGCGCG ACGTGTTCAT GGACGTACTG 
GAACCGGACG TGCCCCTGTA CAACGAATAC CACGCCCTCA TCGTGCGGGT GGCCAAGGAC 
TGGTGCCGCG CCCGCGCCCC CCGTTGCGCC GACTGCCCCC TGTGCTCCTT CCTTGACGGC 
GGGGTGGCCT GA
 
Protein sequence
MRGKRERLLR EMYAAMHARL GPSGWWPGET PLEICVGAVL TQNTAWTNVE KAICRLRDAG 
ALASGQTLLS LPEAELSELI RPAGFFRLKA VRLRNLLRFL DDACGFDFGV LAGQDLDDLR 
PRLLKVSGVG PETADSVLLY AVGLPTFVVD AYTRRILHRH GMVPDDIPYH ELRDVFMDVL 
EPDVPLYNEY HALIVRVAKD WCRARAPRCA DCPLCSFLDG GVA