Gene DvMF_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3091 
Symbol 
ID7175037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3904102 
End bp3904599 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID643541628 
ProductNusB antitermination factor 
Protein accessionYP_002437496 
Protein GI218888175 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.10765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACC AGGGCAAAAA ACCCACCCGG CGCAGCGAGC GCGCGCTGGC CTTCCAGGTG 
TTGTACGGGC TCAGCTTTAC CCCGGCCACC AGCGAAGGCG CGTTGCGCGC GGCGTATGCC 
GCCTCGCCCG ATGTGGCCGA CCGCAACGCC GAGGATGAAA AGGCCGACCG CCAAGCCCCC 
GCCACCGCCC CGCAGGGCTA CGCGTGGGAA GTCATCCACG GCGTGTGGAA GACCCAGGCC 
GAACTGGACG AGGCGGTATC GGGCTTTTCA CAGAACTGGC GCGTGGAGCG CATGGGCCGC 
GTGGAACTGA CGCTGCTGCG CATCGCCGTG TACGAAATGC TGTTCCGCGA CGACGTGCCC 
GCCAAGGTGG CCATGAACGA GGCCATCGAG CTTTCCAAGC AGTTCGGCGA CGACAACTCG 
CGCGGTTTCA TCAACGGCAT TCTCGACGCG GTGGCCCGCG CCGTGGAGTC GGGCCGACTA 
ACCCCCAAGG GGCAGTAG
 
Protein sequence
MANQGKKPTR RSERALAFQV LYGLSFTPAT SEGALRAAYA ASPDVADRNA EDEKADRQAP 
ATAPQGYAWE VIHGVWKTQA ELDEAVSGFS QNWRVERMGR VELTLLRIAV YEMLFRDDVP 
AKVAMNEAIE LSKQFGDDNS RGFINGILDA VARAVESGRL TPKGQ