Gene DvMF_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3065 
Symbol 
ID7175011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3870930 
End bp3871478 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content72% 
IMG OID643541602 
ProductHAD family hydrolase 
Protein accessionYP_002437470 
Protein GI218888149 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.643413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCG CGAACCAGCC CGATAAGGCT CTGCTGCCCG ACAAGGCGCT GCTGCTGGAC 
TGGGGCGGCA CGCTGATGCG CGTCATGCCC CGCTGGATGG GGCCGCAACA CGGCTGGACC 
GACGAGGAGC CCATGCCCCA CGCGGGCGAG GTGTTGTGTT CGCTGGCCGC TGGCTGGCGG 
CTGGCGCTGG CGTCCAACGC CTCGGAGTCG GACGAAGGCC CCATCCGCGC GGCCCTTGCC 
CCCATGGGCG TGGGGCCGTT GCTGGCCGGG GTGTACACGT GGCGTTCGGC GGGGTCGCCC 
AAGCCCTGGC CGCCGTTCTG GGCGTATGCG CTGCGCAATC TGGGGCTGCC CGCCAGCAGG 
GTGGTGATGA TCGGCGACGA CTGGACCGGC GACGTGTGGG GCGCCACGCA GGCGGGGATG 
CACGGCATCT GGTTCGATCC GCCGCGCAAC GGAACGGTGC GCGAGGCGCG CACCGCGCCC 
CGCGTGCGCA CCATGCGCGA CTTTCGCGAA CTGCCCGGCC TGCTGGCCGA ACTGGGGTTC 
GAAGGCTGA
 
Protein sequence
MHSANQPDKA LLPDKALLLD WGGTLMRVMP RWMGPQHGWT DEEPMPHAGE VLCSLAAGWR 
LALASNASES DEGPIRAALA PMGVGPLLAG VYTWRSAGSP KPWPPFWAYA LRNLGLPASR 
VVMIGDDWTG DVWGATQAGM HGIWFDPPRN GTVREARTAP RVRTMRDFRE LPGLLAELGF 
EG