| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2888 |
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| Symbol | |
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| ID | 7174830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3643457 |
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| End bp | 3645013 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643541421 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_002437293 |
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| Protein GI | 218887972 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.403346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA GTCTCTCGGA CAGACTGACA GGAGTTTTCC GGAAGTTCAC CGGCACGGGC
CGCCTTGACG AAGCCAACAT TCAGGATGGC CTTCGCGAGG TGCGTCTGGC GCTGCTGGAA
GCCGACGTCA ACTTCAAGGT CGTCCGCGAC TTCATCGAGC GCGTGCGCGA ACGGTGTCTC
GGCCAGGACG TGCTGAAAAG CCTCACCCCT GCCCAGCAGG TGGTGAAGAT CGTCCATGAC
GAACTGGTCG AACTGCTGGG CGGCGGCACC ACCCAGCTGG ATCTGCGCGG CAAGCAGCCT
TACGTCATCA TGATGGTGGG CCTGCAGGGC TCGGGCAAGA CCACGTCGTC TGCCAAGATT
GCCAATCTGC TGCGCAAGCA GAAGATGCGC CCGTACTTGG TGCCAGCCGA CGTGTACCGC
CCGGCGGCCA TCGACCAGTT GCACACGCTG GCCAAGCAGC TCGACATTCC GGCCTACCCC
TCGGCCCCCG GCATGAACCC GGTGGACATC GCCGTGGCCG CCGTGGAAGA CGCGCGCGAA
AAGCAGTGCA ACGTGGTCAT CGTGGACACC GCGGGTCGCC TGCACATCGA CGAAACCCTG
ATGCAGGAGC TGGTCTCCAT CAAGGGCCGC GTCGAGCCGC AGGAAATTCT GTTCGTGGCC
GACGCCATGA CCGGCCAGGA CGCGGTGACG GTTGCCGAAT CGTTCAACAC CGCGCTCGAC
ATTTCCGGCG TCGTGCTCAC CAAGATGGAC GGCGATGCCC GCGGCGGCGC GGCCCTGTCC
ATCCGCTCTG TCACCGGCAA GCCGGTGAAG TTCGTGGGCA TGGGCGAGAA GCTCTCGGAC
ATCGAGGTCT TCCACCCCGA CCGCGTGGCG GGCCGCATTC TCGGCATGGG CGATATGATG
ACGCTCATCG AGAAGGCGCA GTCCACCATC AAGGCCGAAG AAGCCGAGGA ACTGGGCCGC
AAGTTCCAGA AGGCGGAGTT CGACCTGGAG GACTTCCGCA CCCAGATGCG CCGGCTGAAG
AAGCTGGGCT CGCTGGAAGG CATCCTGAAG CTGATTCCCG GCATGGGCGC GCTGCGCGAA
AAGCTGGGCG AGATGAACGT GCCGGAAAAG GAGATGGGCC GGGTAGAGGC CATCATTAAT
TCCATGACCA TGCAGGAACG CCGCAACCCC AAGGTGCTGA ACGGCAGCCG CCGCCAGCGC
ATCGCCATGG GTTCCGGCAC CACCGTGCAG GACGTGAATC AGCTGATCAA CAATTTCGAG
CAGATGCGCG GAATGATGAA AAAAGTCATG GGCGGGGGCA AACCCGCGCA GGCCGGAAAG
ATGCCGCGCA TGCCCAAGCT GCCCGGAATG GGCGGCATGG GGGGGCTTGG AGGAATGGGT
GGACTGCCCG GTATGGGCGG CCTGGGCGGG CTCGGCGGCA TGCCGGGAAT GCCGGGCATG
CCCGGCACGG GTGACGGCGA AGGCGCGCCC GGCGGCCCCA ACCCCATGTC CAAGACCGCG
CTCAAGAAGA AGAAGCAGCT GCGCAAGCAG CAACGCAACA AGAGCAAGAA GCGCTGA
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| Protein sequence | MFDSLSDRLT GVFRKFTGTG RLDEANIQDG LREVRLALLE ADVNFKVVRD FIERVRERCL
GQDVLKSLTP AQQVVKIVHD ELVELLGGGT TQLDLRGKQP YVIMMVGLQG SGKTTSSAKI
ANLLRKQKMR PYLVPADVYR PAAIDQLHTL AKQLDIPAYP SAPGMNPVDI AVAAVEDARE
KQCNVVIVDT AGRLHIDETL MQELVSIKGR VEPQEILFVA DAMTGQDAVT VAESFNTALD
ISGVVLTKMD GDARGGAALS IRSVTGKPVK FVGMGEKLSD IEVFHPDRVA GRILGMGDMM
TLIEKAQSTI KAEEAEELGR KFQKAEFDLE DFRTQMRRLK KLGSLEGILK LIPGMGALRE
KLGEMNVPEK EMGRVEAIIN SMTMQERRNP KVLNGSRRQR IAMGSGTTVQ DVNQLINNFE
QMRGMMKKVM GGGKPAQAGK MPRMPKLPGM GGMGGLGGMG GLPGMGGLGG LGGMPGMPGM
PGTGDGEGAP GGPNPMSKTA LKKKKQLRKQ QRNKSKKR
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