Gene DvMF_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2888 
Symbol 
ID7174830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3643457 
End bp3645013 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content64% 
IMG OID643541421 
Productsignal recognition particle protein 
Protein accessionYP_002437293 
Protein GI218887972 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.403346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATA GTCTCTCGGA CAGACTGACA GGAGTTTTCC GGAAGTTCAC CGGCACGGGC 
CGCCTTGACG AAGCCAACAT TCAGGATGGC CTTCGCGAGG TGCGTCTGGC GCTGCTGGAA
GCCGACGTCA ACTTCAAGGT CGTCCGCGAC TTCATCGAGC GCGTGCGCGA ACGGTGTCTC
GGCCAGGACG TGCTGAAAAG CCTCACCCCT GCCCAGCAGG TGGTGAAGAT CGTCCATGAC
GAACTGGTCG AACTGCTGGG CGGCGGCACC ACCCAGCTGG ATCTGCGCGG CAAGCAGCCT
TACGTCATCA TGATGGTGGG CCTGCAGGGC TCGGGCAAGA CCACGTCGTC TGCCAAGATT
GCCAATCTGC TGCGCAAGCA GAAGATGCGC CCGTACTTGG TGCCAGCCGA CGTGTACCGC
CCGGCGGCCA TCGACCAGTT GCACACGCTG GCCAAGCAGC TCGACATTCC GGCCTACCCC
TCGGCCCCCG GCATGAACCC GGTGGACATC GCCGTGGCCG CCGTGGAAGA CGCGCGCGAA
AAGCAGTGCA ACGTGGTCAT CGTGGACACC GCGGGTCGCC TGCACATCGA CGAAACCCTG
ATGCAGGAGC TGGTCTCCAT CAAGGGCCGC GTCGAGCCGC AGGAAATTCT GTTCGTGGCC
GACGCCATGA CCGGCCAGGA CGCGGTGACG GTTGCCGAAT CGTTCAACAC CGCGCTCGAC
ATTTCCGGCG TCGTGCTCAC CAAGATGGAC GGCGATGCCC GCGGCGGCGC GGCCCTGTCC
ATCCGCTCTG TCACCGGCAA GCCGGTGAAG TTCGTGGGCA TGGGCGAGAA GCTCTCGGAC
ATCGAGGTCT TCCACCCCGA CCGCGTGGCG GGCCGCATTC TCGGCATGGG CGATATGATG
ACGCTCATCG AGAAGGCGCA GTCCACCATC AAGGCCGAAG AAGCCGAGGA ACTGGGCCGC
AAGTTCCAGA AGGCGGAGTT CGACCTGGAG GACTTCCGCA CCCAGATGCG CCGGCTGAAG
AAGCTGGGCT CGCTGGAAGG CATCCTGAAG CTGATTCCCG GCATGGGCGC GCTGCGCGAA
AAGCTGGGCG AGATGAACGT GCCGGAAAAG GAGATGGGCC GGGTAGAGGC CATCATTAAT
TCCATGACCA TGCAGGAACG CCGCAACCCC AAGGTGCTGA ACGGCAGCCG CCGCCAGCGC
ATCGCCATGG GTTCCGGCAC CACCGTGCAG GACGTGAATC AGCTGATCAA CAATTTCGAG
CAGATGCGCG GAATGATGAA AAAAGTCATG GGCGGGGGCA AACCCGCGCA GGCCGGAAAG
ATGCCGCGCA TGCCCAAGCT GCCCGGAATG GGCGGCATGG GGGGGCTTGG AGGAATGGGT
GGACTGCCCG GTATGGGCGG CCTGGGCGGG CTCGGCGGCA TGCCGGGAAT GCCGGGCATG
CCCGGCACGG GTGACGGCGA AGGCGCGCCC GGCGGCCCCA ACCCCATGTC CAAGACCGCG
CTCAAGAAGA AGAAGCAGCT GCGCAAGCAG CAACGCAACA AGAGCAAGAA GCGCTGA
 
Protein sequence
MFDSLSDRLT GVFRKFTGTG RLDEANIQDG LREVRLALLE ADVNFKVVRD FIERVRERCL 
GQDVLKSLTP AQQVVKIVHD ELVELLGGGT TQLDLRGKQP YVIMMVGLQG SGKTTSSAKI
ANLLRKQKMR PYLVPADVYR PAAIDQLHTL AKQLDIPAYP SAPGMNPVDI AVAAVEDARE
KQCNVVIVDT AGRLHIDETL MQELVSIKGR VEPQEILFVA DAMTGQDAVT VAESFNTALD
ISGVVLTKMD GDARGGAALS IRSVTGKPVK FVGMGEKLSD IEVFHPDRVA GRILGMGDMM
TLIEKAQSTI KAEEAEELGR KFQKAEFDLE DFRTQMRRLK KLGSLEGILK LIPGMGALRE
KLGEMNVPEK EMGRVEAIIN SMTMQERRNP KVLNGSRRQR IAMGSGTTVQ DVNQLINNFE
QMRGMMKKVM GGGKPAQAGK MPRMPKLPGM GGMGGLGGMG GLPGMGGLGG LGGMPGMPGM
PGTGDGEGAP GGPNPMSKTA LKKKKQLRKQ QRNKSKKR