| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2882 |
|---|
| Symbol | |
|---|
| ID | 7174824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3639113 |
|---|
| End bp | 3639991 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643541415 |
|---|
| Product | Ribonuclease H |
|---|
| Protein accession | YP_002437287 |
|---|
| Protein GI | 218887966 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 0.507441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAGG GCCTGCTGGC TAATCTAGCG CCCCCACACC CGTCCACGCC ATACGTAGGT
ATCGACGAGG CCGGGCGCGG CTGCCTTGCC GGGCCGGTGG TTGCCGCCGC CGTCATCCTG
CCTCCCCACG CCGATGCGGC CACCCTGGCC GACCTGTTGC CCGACCTTGC CGGGCTGACC
GACTCCAAGA AGCTCACCGC CGCCAAACGC GAGGCACTGG CCCCGCGCAT CCGCCAGCAC
GCCGTGGCCT GGGGCCTGGG CGTGGTCTGG CCGCGCGACA TCGAGCGCAT CAACATCCTG
CAGGCCACCT TCCACGCCAT GTGGCGCGCC GTGCGTTTCC TGCGCCCCGG ACACGCGGTA
CGGAATGCGG CGAACGCCAC CGGCCGGGCT CCGGCGCCCC TGCCCGATCT GCATGGCCTG
CCCAGTGTGT CTGGCAAATT CGACCTGTCC GATATTCCGC TGATCATCGA CGGGGACAAG
ATCATCCCCG CCGCCGTGTT CGCAGGGCAG CCCCCCTGCC CGGCCCGTCC GACCGGTCCG
GTCGGTCCGA TCGGTTCGGC CCTTCCGGTC AGTTCGCTCC GTTCGGATCA GGCCCCCCCT
GCCCCCCCGT TTCCCGCGCC CGTGCAGCGC GCCGTGGTGG GGGGCGATGC ACTGGTTCCG
GCGGTGTCCG CCGCATCCAT CCTGGCCAAG ACGTTTCGCG ACCAGCTCAT GACAGCACTG
GACCGCCGTT TTCCCCACTA CGGTCTGGCC GTGCACAAGG GCTACGGCAC GGCGGAGCAC
ATGGCGGCCA TTGCCGAACA CGGCCCCTGC CCGCAACACC GGGCCACCTT TCGCGGGGTG
CGACCGGAAC CGCCCCAGAC GCAGGGTACC CTGCTGTGA
|
|---|
| Protein sequence | MLQGLLANLA PPHPSTPYVG IDEAGRGCLA GPVVAAAVIL PPHADAATLA DLLPDLAGLT
DSKKLTAAKR EALAPRIRQH AVAWGLGVVW PRDIERINIL QATFHAMWRA VRFLRPGHAV
RNAANATGRA PAPLPDLHGL PSVSGKFDLS DIPLIIDGDK IIPAAVFAGQ PPCPARPTGP
VGPIGSALPV SSLRSDQAPP APPFPAPVQR AVVGGDALVP AVSAASILAK TFRDQLMTAL
DRRFPHYGLA VHKGYGTAEH MAAIAEHGPC PQHRATFRGV RPEPPQTQGT LL
|
|---|
| |