Gene DvMF_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2853 
Symbol 
ID7174794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3607316 
End bp3607948 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID643541385 
Productbeta-lactamase domain protein 
Protein accessionYP_002437258 
Protein GI218887937 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCGC GCATTTCCAC CTTTCCCATG GGGCCGCTGG AGACCAACGG CTACCTCGTG 
CATCTGAACG GGGCAGCCGT GGCCGTGGAC CCGGGCGGCA CGCCGCGCCC CATGCTCCAG 
TACGCGGAAA AGAACGGGCT TGCGCTCACG CACATCCTGA TCACCCACCT GCACTTCGAC 
CACATCTACG GCGCGGCGGC CCTGGTGGAA GCCTCCGGCG CGCCGGTGCT GGCGAGCGCG 
GCCGACGCCT TCCTGATGGA GACGGAACTG GGCAGGGGCG GGGCCTTCGG CTTTCCGCGC 
GTGACGCCGT TCAGCTACCA GCCGGTGGAG GAAGGCGACC TGGACCTGGG CGCCATCACC 
TGTCGCGCCC TGGCCACGCC GGGCCATACG CCGGGCAGCC TGTCGTTTCA TTTTCCGCAG 
GTGGGTGCGG TGATCGTGGG CGACCTGCTG TTCCACCGGT CCATCGGCCG CACGGACTTT 
CCCGGCGGCG ACCTGGACGC CCTGCGCCGC TCGGTGGTGC AGAAGATATT CACCCTGCCC 
GACGACACCG TGGTCTACCC CGGTCACGGG CGGGAAACCA CCGTGGGTTC CGAAAAATTG 
AACAACCCGT ACTTCACGGA GTTTTCCCTG TAG
 
Protein sequence
MKPRISTFPM GPLETNGYLV HLNGAAVAVD PGGTPRPMLQ YAEKNGLALT HILITHLHFD 
HIYGAAALVE ASGAPVLASA ADAFLMETEL GRGGAFGFPR VTPFSYQPVE EGDLDLGAIT 
CRALATPGHT PGSLSFHFPQ VGAVIVGDLL FHRSIGRTDF PGGDLDALRR SVVQKIFTLP 
DDTVVYPGHG RETTVGSEKL NNPYFTEFSL