| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2682 |
|---|
| Symbol | |
|---|
| ID | 7174620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3390230 |
|---|
| End bp | 3391501 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643541214 |
|---|
| Product | Membrane-bound lytic murein transglycosylase B-like protein |
|---|
| Protein accession | YP_002437089 |
|---|
| Protein GI | 218887768 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.342063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCCA TGCAAGCGTA TCAGACCGGG ACCACTGCAG GCAATGATGC GGCGCACGCG
CCGGACGGCT CAGGCCCGAA CCCTCTGGAT CAGGACGCCG GGTACCGCCG TGCGGCCTTG
TGGCGCGCGC TGGCATCCGC CGCGCTGTGC GCCCTGTTGG TGGCGGGGTG CAGCGGCACC
CGGCAGGCCG CCGCGCCGGA AAGCGCGACC ACGACGCCGT CCCCCGGCGA GGTGCGCGTG
GAGACCGCCG TTCGTCCTTC CGAAGAGCCG TTGGCCCCCG GCAGGCCCGC CGCCTGCTGG
ACCTCCCTGC TGGGCCGCCT GGCCGCAGAC GGCGTGTCCG GCGGACGCGT CGATGCGCTG
TTCGTCCAAC TGGGCGATGC GGTTTCGCCA GACCCCATGG GCCGCAAGGT CAAGGAACTG
TACACCACCA AGTTCCTGCG GCCAGACCCG CAACCAACGC CGCCCGGCCA GAAGCCCAAG
CCCGTGCGCC CGCCCATGTA CCCCGGCGTG GTCACCGACG AGAACGCGGC CAAATGCCGC
GCCTTCCTGA CGGAAAACGC CCGCTGGTTC TCGCTGGCGG AATCGCGCTA CGGCGTGCCG
CGCGAGGTGG CCGTGTCGCT GCTGTTCGTG GAAACGCGCC TGGGCACGGC CCTCGGCAAG
GGCAACGCCT TCCGCAATCT GGCCGCCATG GCCGCCGCGG ACAACCCGGA CATGGTGCCC
GGCTACATAG CCGCGCTGCC CGGCGCGGAT GGCAACCTGG ACTGGATTTC GCTGCGCATG
CGCCAGAAGT CGGACTGGGC CTACCAGGAA CTGAAGGCGC TCATCCGCCA CGCCGACGCG
CTGGGGCAGG ATCCGCTGAC CATGCCCGGC TCCATCTACG GGGCCGTGGG GATCTGCCAG
TTCATGCCCA GCAATATCCC GGCCTACGGC GTGGACGGCG ACGGAGATGG CCGCGTGGAC
CTGTACACGG TGGGTGACGC GGTGTTCAGC CTGTCCAATT ATCTCGACAA GCATGGCTGG
CAGCCCGGCA TGCGGCGTGA TGCACGTTAC AACGTGCTGA AACGCTACAA CAACAGCGCG
GCCTACGCCA ACACCATCCT GGCGCTGGCG GACAGGGTGG CGGGCAAGCC CGCCCAACCG
GGAAAGCCCG CGAAACCCGC AAAATCTGCC CAGCCCGGCA AGCCCGTACA GCCTGCAGCC
GCGAAGTCCA AGGCACAGGG CAGCCCCGCG CAGCCCGTCA GGGCATCCGC CGCCGTCTCG
GCTGCGCAGT AG
|
|---|
| Protein sequence | MHSMQAYQTG TTAGNDAAHA PDGSGPNPLD QDAGYRRAAL WRALASAALC ALLVAGCSGT
RQAAAPESAT TTPSPGEVRV ETAVRPSEEP LAPGRPAACW TSLLGRLAAD GVSGGRVDAL
FVQLGDAVSP DPMGRKVKEL YTTKFLRPDP QPTPPGQKPK PVRPPMYPGV VTDENAAKCR
AFLTENARWF SLAESRYGVP REVAVSLLFV ETRLGTALGK GNAFRNLAAM AAADNPDMVP
GYIAALPGAD GNLDWISLRM RQKSDWAYQE LKALIRHADA LGQDPLTMPG SIYGAVGICQ
FMPSNIPAYG VDGDGDGRVD LYTVGDAVFS LSNYLDKHGW QPGMRRDARY NVLKRYNNSA
AYANTILALA DRVAGKPAQP GKPAKPAKSA QPGKPVQPAA AKSKAQGSPA QPVRASAAVS
AAQ
|
|---|
| |