| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2539 |
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| Symbol | |
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| ID | 7174475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3207324 |
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| End bp | 3209369 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541069 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002436946 |
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| Protein GI | 218887625 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAACG GCAACGGGCT GCCGCCCGAC GCCCCGGAAC TGCACATCGG CCTGCTGACC
ACCTATCCGC CGCTCAGCTA CATGGTGGAG GGGGTGCCAG CGGGCTTCGC GCGCGATCTG
GCCGAGGCCG TGGCCCAGGC GGCTGGCCGC AAGGTGGTGT TCCATGTCGA CGACAACGGC
GTGGCCCTGC GGGACGAACT GGCCGGGGGC AGTCTGGACG CACTGGCCCT GATGGCGGAA
ACGCCGGAAC GCCTGGCCCG GTTGGAGTTC AGCGAGCCCG GCGTGGAAGT GGCGGAGCGC
ATCTACGTGC GGCGCGACAG CGGCGCCCAC CCGCGCGGCG TGGCCGATCT TTCCGGGCTG
CTGGTGGCCG TGGTGGAAAG CCATTCCAGC CACCAGTACC TGCGGAGCAT GCCCGGCCAG
CGTCTGCTGC CGGTGCCCAC CCCGCTGGAT GCGGTGATGG CCGTGGCCTG GGGACGAGCC
GACGCCCTGA TGGCGCCGGA ACCCGTCGTT GAGCATATCA TCCGCCGCCT GCCCACGGAC
GCCCCCCTGG AGCCTTCAGG CCAGCCGCTG CGCACGCTGC GTTTTTCGTT CGGGGCAGCC
AAGGGCAACA CCCCCCTTGT GGCCGTACTG AACGAGGCCC TCGTCAAGGT GCGCGCCTCT
GGCGAATACG ACAGGCTGTA CCGCCGCTGG TTCGGCGGCA ACGTGCTGTC GCGCTATACC
GACCGCGAAC TGCTGCTGGC CGGTGTGGCC TTTGCGTTAC TGACCGTGTT CCTGGGGGCC
TCCGTGGTGC TGCTGTCGCG CACGGTGCGC CTGCGCCGCG ACGTGGAGGC GGGCACCGTG
GCCACGCGCG AGGCGCGGGC ATCCATGCTG CGCGAGGCCA TCAGCAGGCA GCGGGCCGAG
CAGGAGGCGG AGCGCTTCTT CGCCCTGTCG CTGGACCCGG TGGCCATCGT CACCCAGCAG
GGCGCGCTGC GTCGGGTAAA CCCGGCCTGG GTGCGGCTGT TCGGCTTCTT GCCGGAAGAA
GTGACCGGAC ACCCGTTTCT GGACTTCGTG CACCCGGACG ATATGGATGC AAGCCGCCCT
CTGCTGGTGG GCGGCATGAA CGGACTCGCT GGGGTGGTGG CCACCCCGGT GGAGAATCGC
TTCCGCTGCA AGGACGGGGT GTACCGCTGG CTTGCCTGGG CCTCGGTGGT CTTGCCCGAG
GAGGGGCTGG TCTATCTGTC CGGGCGCGAC GTGACCCAGC GCAAGGAGGC GGAACTGCAC
CTTGAGCGCC AGGCCGAGGA ACTGCGCCGT TCCAACGCGG AACTGGAGCA GTTCGCCTAC
ATCGCCTCGC ACGACCTGCA GGAGCCGCTG CGCAAGATCG CAAGCTTTCT CGACCTGTTG
GCCAAGCGCT ACGTGGGACG GCTGGACAGC GATGCCGACG AGTTCATCGG CTTTGCCGTG
GACGCCGCCC GCCGCATGAA GGACATGATC GAGGATCTGC TGGCCTATTC GCGGGTCAGC
ACGCAGGGGC GGGAGTTCGA GGACACGGAC ATGGAGAAGG TGGTGGACAC CGTGCTCTCG
GATCTCGGCC TGCTGTTCGA GGAGGCCGGG GCCACGGTGG AACGGGGCCC GCTGCCCATG
ATCCGGGCCG ACCGGGTACA GATGGAGCAG TTGCTGCGCA ACCTGCTGGG CAACGCGGTG
AAGTACCGGT CGGAGGCGCC CCCGAGCATT TCCATCGGGG CGGAACGGGC CACGGGCGAC
GGGCACCCCG GCAAGGCGTG GGTATTTCAT GTGCGCGACA ACGGCATCGG CATGAAGCCG
GAGCATTTCG AACGCATCTT CCGGGTGTTC CAGCGGTTGC ACGGGCCGGG GCGCTATCCG
GGCACCGGCA TTGGCCTTGC GGTGTGCAAG AAGATCGTGG AGCGGCACGG CGGCACCATC
GACGTGGAAT CGGTACCGGG CAGGGGCAGT ACCTTCCGCT TCGTGATGCC GGACAGGATT
GCCAGGCCCG CGAGTCATGA CAGGCCAGAC AGGTACGGCG GGCAGGTCGG GCAGCAGTTG
CCGTAG
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| Protein sequence | MRNGNGLPPD APELHIGLLT TYPPLSYMVE GVPAGFARDL AEAVAQAAGR KVVFHVDDNG
VALRDELAGG SLDALALMAE TPERLARLEF SEPGVEVAER IYVRRDSGAH PRGVADLSGL
LVAVVESHSS HQYLRSMPGQ RLLPVPTPLD AVMAVAWGRA DALMAPEPVV EHIIRRLPTD
APLEPSGQPL RTLRFSFGAA KGNTPLVAVL NEALVKVRAS GEYDRLYRRW FGGNVLSRYT
DRELLLAGVA FALLTVFLGA SVVLLSRTVR LRRDVEAGTV ATREARASML REAISRQRAE
QEAERFFALS LDPVAIVTQQ GALRRVNPAW VRLFGFLPEE VTGHPFLDFV HPDDMDASRP
LLVGGMNGLA GVVATPVENR FRCKDGVYRW LAWASVVLPE EGLVYLSGRD VTQRKEAELH
LERQAEELRR SNAELEQFAY IASHDLQEPL RKIASFLDLL AKRYVGRLDS DADEFIGFAV
DAARRMKDMI EDLLAYSRVS TQGREFEDTD MEKVVDTVLS DLGLLFEEAG ATVERGPLPM
IRADRVQMEQ LLRNLLGNAV KYRSEAPPSI SIGAERATGD GHPGKAWVFH VRDNGIGMKP
EHFERIFRVF QRLHGPGRYP GTGIGLAVCK KIVERHGGTI DVESVPGRGS TFRFVMPDRI
ARPASHDRPD RYGGQVGQQL P
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