| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2489 |
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| Symbol | |
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| ID | 7174425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3141523 |
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| End bp | 3144033 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643541020 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002436897 |
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| Protein GI | 218887576 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTC CGCAGGGTCG GCACATGGCC GACGAAGAAG CCATCAACCG CTGCCTGCAA
CTCACCTTTC CCCCGGTCAT GGTGCAACTG GTGCAGGCAC TGGTGGCGCC GTTTCCCGAA
TTCTCCACCA TTGCCCGCAT CCTGGCCATG GACCCCATGC TGGCCGCCGC CGTGCTGAGC
CTAGTCAACT CGCCCTACTA CGGGCTGGGC ACCAAGGTTT CCGACCTGCA ACGCGCCGCC
ACGGTGCTGG GCACCCGCGA AATCCTCAAG CTGGCCCTGT CGCTGTCGTT CCAGAAGCGG
GTGAGCAACG AGCTGAAGCG CCCCCAGCAG GCCATGTACC AGGACTGGCG GCTGGTGGTC
TGGTCGTCCA TCGCAGCGGA GCAGATCGCC CTGCGGGTGC AGCCCGACAC GGCCCACCTG
GCCTACCTGG CCTCGCTGCT GAAAGACCTT GCCCTGTTCA TGCACCTGTG CTCCGCCGAC
GAAGACCCGG TGCTGCGCGG CAAGGCCTGC ATCACCAGCC TGGAACGCGA CCAGCTGTCG
CTGGAAAACA CCTGCTGGGG CGCCGACCAC GCGGCCATGG CCCGCAACAT CATCCACCGC
TGGGGCCTGC CCGAGGCCAT CGCCGACGCC ATCGCCAGCC ATCACGACCT GGACGGCGTG
GCCCACCATA CTCCGCTGAC CCAGGCGGTG ATCCTGGGCA CCCAGTGGGC CGACCTGCTG
CACGGACAGG CCACCCATCC CGCGCTGATC ATCCAGTTCG AAATGCTGCT GCGCACCCGC
CTTTCACTGG ACGACCAGGG GCTGGAAAAC CTGCGCGAGG CCTGCGCCCA GCGCTTCAAG
TCCATGCTTG CCCAACTGGC CATCCAGGAC CGTCCGGCAG GCACCCGGCT GTACGAGCAG
TCGCTGGAAA CCCTGCAATC CTTCTATTTC CTGGGGGCGG AGCTGTCGCA CGTGGCGGGC
GGCCTGCCCT CGCTAGCGGC CACCCTGGGT CGGCAGTTGC GCTGGTACTG GAACGTGCAG
CGCTGGGAAG TGGCCCTGCG CGTGCCCGGC AGCGAAGAGT ACCTGCTGTT CAGCGGCGAC
GAGACCACCC CGACGCCCCG GCAGGCAGGC CCCGCCCCCT TCGCGCGGCT GCCCTGGCAG
ACCGGCCAGG AACGGGTGCC GCTGTCCGCA TCGGGCACCG ACTGGGGCCA GTTGCGCCTG
CCCAAGGACG CCCTGGCCCC GGCCCGCAAG TCGGCCCTGC TGGTGTACTG CCACTTCATG
GCCATGGCGC TGGAGAATTA CTACCACCAG CAGGCCGTGC TGGAGGCCAA GGCCGACACC
CTGGACGCCC TGCCCCTGGG CGTGGCCCGT CTGGACCGCG AAGGGCTGGT GGTGGAAACC
AACCGCCGCT TCCTGGACTA CGTGGGTCGC GACGACCTGG CCCCCCGCAC GCCGGTGCGC
CCCCTGCTGT CCGAATCGCT GGGGCTGGAC TTCGGCCCGG AGTGGCAGGC CTTCACCGAC
GACGGCGGCC CTTCGTTCAT CAGCCGCCTG TTCTGCCCCA CCGACGCGGC GGGCCAGCGC
ATGGGCGCGC CCTGCGCCTA CGTTTCGCTG CACCGCCGCC GCGATGCCTC GCACGATGAC
GTGCTGCTGC TCATCGAGGA CGTGACGGAA ATCTCCGACG TGGACGTGCA GAGCCTGCGC
CAGCGCGACT TTCTTGAGCG GCTGCTGGAT TCCATGCAGG AAATCGTGCT CACCGTGGAC
CGCACGGGGC AGATATCGTG GGCCTCGCGC CGCTGCGCCG GGTTGCGGGG CAAGAACCTG
TTCGCCTCGT CGCGCCCCTC GGCCACCTTT ACCGATACCT GGGACGCGGC CTACCTGTCC
GGCTCGTCAC CGGCTGCCCC GGTGGAGGCG GTGCTGGAAC TGGGCGACGG CAGCATGGGC
CTGTTCGAGC TGGTCTTTTC CGCGCTGGAC TCGCGCGAGC ACGAGGGCCC TGCCTTCCTG
GTGGTGGGCC GCGACCTGAC CAGCATCCGC CGCCTGGAGG AAAAGGTGAA GCAACAGGCC
ATGTACGACG GCCTGACCGG GCTGTTCAAC CATTCGCAGT TCCACATGAT CCTGGAACGC
GAAATGGAGC GCAGCCGCCG CACCAACCGC CAGCTGGGGC TGATCTTCTT CGACCTTGAC
CGGTTCAAGG CCATCAACGA CACCTATGGC CATCAGGCGG GCGATACCGT GCTGCGCCGC
GTGGCGGCGG GCATCAGCGC GGTGGTGCGC AAGGGAATGG ACTTTCCCTG CCGCTACGGC
GGCGACGAAT TTGCCGTGGT TGTCACCGAG GTGACCCCCG AGATCATGGA AGGCCTTGCC
CGGCGCATCC GCGAAGGCGT GGTGACCAGC TGCAAGGGCG CCGTGGACCT GAGCATGGGC
CTGGCCCTGC TGACGCCGGC GGATACGGGC GAAAACCTGG TCCAGCGGGC GGACAGGGCC
AGTTATGCCG CCAAGAAGCT GGAAGGGGTA AAGGTGCGCT GGGCCGAGTA G
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| Protein sequence | MTVPQGRHMA DEEAINRCLQ LTFPPVMVQL VQALVAPFPE FSTIARILAM DPMLAAAVLS
LVNSPYYGLG TKVSDLQRAA TVLGTREILK LALSLSFQKR VSNELKRPQQ AMYQDWRLVV
WSSIAAEQIA LRVQPDTAHL AYLASLLKDL ALFMHLCSAD EDPVLRGKAC ITSLERDQLS
LENTCWGADH AAMARNIIHR WGLPEAIADA IASHHDLDGV AHHTPLTQAV ILGTQWADLL
HGQATHPALI IQFEMLLRTR LSLDDQGLEN LREACAQRFK SMLAQLAIQD RPAGTRLYEQ
SLETLQSFYF LGAELSHVAG GLPSLAATLG RQLRWYWNVQ RWEVALRVPG SEEYLLFSGD
ETTPTPRQAG PAPFARLPWQ TGQERVPLSA SGTDWGQLRL PKDALAPARK SALLVYCHFM
AMALENYYHQ QAVLEAKADT LDALPLGVAR LDREGLVVET NRRFLDYVGR DDLAPRTPVR
PLLSESLGLD FGPEWQAFTD DGGPSFISRL FCPTDAAGQR MGAPCAYVSL HRRRDASHDD
VLLLIEDVTE ISDVDVQSLR QRDFLERLLD SMQEIVLTVD RTGQISWASR RCAGLRGKNL
FASSRPSATF TDTWDAAYLS GSSPAAPVEA VLELGDGSMG LFELVFSALD SREHEGPAFL
VVGRDLTSIR RLEEKVKQQA MYDGLTGLFN HSQFHMILER EMERSRRTNR QLGLIFFDLD
RFKAINDTYG HQAGDTVLRR VAAGISAVVR KGMDFPCRYG GDEFAVVVTE VTPEIMEGLA
RRIREGVVTS CKGAVDLSMG LALLTPADTG ENLVQRADRA SYAAKKLEGV KVRWAE
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