Gene DvMF_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2325 
Symbol 
ID7174259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2929640 
End bp2930539 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID643540855 
Productectoine/hydroxyectoine ABC transporter solute-binding protein 
Protein accessionYP_002436734 
Protein GI218887413 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT TTCCCCGCTC CGCCCCCTCG TTGCTCGGCG TCATCGCCGT GGTCTGCGCG 
GTGACGCCCC TGCTCTACGC GCTGCTGGAA CTGCCCGACC CGGACAATGC GGCATGGCGT 
GGGGGCACCA TTCGGGTGGG CTACGCCCTC GAACCCCCGT ACGCCTACCG CACCCCGGAA 
GGCACCGTGA CCGGCGAGGC TCCGGAAGTG GCCCGCGCCG CGCTGACCCG CGCGGGCATC 
ACGCGGGTGC GCTGGGTGCT CGGCGACTTC AACGCCCTGA TCCCGGACCT GCTGGCCGGA 
CACATCGACA TGATCGCGGC GGGCATGTTC ATCACGCCCG ACAGGGCCGC CCGCGTCGCC 
TTTTCACTGC CCACCAGTTC CGTGGGGCAA GGGCTGCTGG TGCGGCGCGG CAACCCGCGC 
GGCCTGCACG ACTACGCATC CCTTGCCGAG CGCAGCGATG TCACCCTTGC CGTGCTGGAC 
GGTGCGGTGG AGCATCGCCA GTTGCTGCTG CTGAACATGC CCGCCGAACG GCTGTTCCCC 
GTGTCCGACG TGCACGCGGG CATGACCGCC GTGCGCAAGG GCCGCGTGGA CGGTCTGGCC 
CTCTCCGGCC CCACGGTGGT ACTGTTGGCC CGGCAGCACC CCGAAGAACT GGAGGCCGCG 
CGCCCCTTCA CCCAGCCGGT CATCGACGGC AAATCCGTGG CCGGATTGTG CGCCTTTGCC 
TTTCGCAAGG AGGACGCCCC CCTCGCGGAC AGGGTGAACG AGCAGTTGCG CGCCTTCGTC 
GGCACACCGG AGCACCTTGC GCTGGTGCGG CCCTTCGGCT TCGATGGCTC AACCCTGCCC 
CCCTGGTCCG CTCCCGGCAC GCCGCACGGG CAGGACGGAC GGAACGGGCC AGGCCAGTGA
 
Protein sequence
MPRFPRSAPS LLGVIAVVCA VTPLLYALLE LPDPDNAAWR GGTIRVGYAL EPPYAYRTPE 
GTVTGEAPEV ARAALTRAGI TRVRWVLGDF NALIPDLLAG HIDMIAAGMF ITPDRAARVA 
FSLPTSSVGQ GLLVRRGNPR GLHDYASLAE RSDVTLAVLD GAVEHRQLLL LNMPAERLFP 
VSDVHAGMTA VRKGRVDGLA LSGPTVVLLA RQHPEELEAA RPFTQPVIDG KSVAGLCAFA 
FRKEDAPLAD RVNEQLRAFV GTPEHLALVR PFGFDGSTLP PWSAPGTPHG QDGRNGPGQ