Gene DvMF_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2280 
Symbol 
ID7174213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2868302 
End bp2869330 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID643540810 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002436690 
Protein GI218887369 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT ATACCGCCCT GATGCAGGAA CTGGAAGCCG CCCCCCGCAC CTGGCTTGTC 
ACCGGGGTTG CCGGATTCAT TGGCTCCAAC CTGCTCGAAA CGCTGTTGAT GCACGGTCAG
AAGGTGGTGG GGCTGGACAA CTTCGCCACC GGCTATCAGC GCAACCTGGA CATGGTGCGC
GAAATCGTGG GCGCGGACCT GTGGCGCAAC TTCCGCTTCA AGGAAGGCGA CATCCGCAAC
CTGGAGCACT GCCGCGAGGT GTGCGAAGGC GTGGACCACG TGCTGCACCA GGCCGCCCTG
GGTTCCGTGC CGCGCTCCAT CGAAGACCCC ATCCTGGCCA ACGAAAGCAA CATTTCGGGC
TTCGTGAACA TGATGGTGGC CGCCCGCGAC GCCAAGGTGA AAACCTTCGT CTACGCCGCG
TCCAGTTCCA CCTACGGCGA CGAACCCACC CTGCCCAAGG TCGAGGACAA GATCGGCAAG
CCGCTGTCGC CCTACGCGGT GACCAAGTAC GTCAACGAAC TGTACGCCGA CGTGTTTGCC
ACCTGCTACG GCATGAAGGC CATCGGCCTG CGCTACTTCA ACGTGTTCGG CAAGCGGCAG
GATCCCTTTG GCGCCTATGC CGCCGTCATT CCGCAGTGGT TCGCCTCGCT GCTGCGCGGC
GAGACCGTGT TCATCAACGG CGACGGCGAG ACCAGCCGCG ACTTCTGCTA CATCGACAAC
TGCGTGCAGG CCAACCTGCT GGCCGCCACC GCCACCGACG AGGCGGCCCT GAACACGGTG
TACAACGTGG CCTTTGGCGA ACGCACCGAC CTGAACCAGC TGTTCGACCT GATCCGCGAG
GAAGTGAGCC GCCACAAGCC GGAAGCGGCC ACGGCCAAGC CCGAGCACCG CGAATTCCGT
TTCGGCGACG TGCGCCATTC CTTGGCCGAC ATCAGCCGCG CCCACACCCG GTTGGGCTAC
GAGCCGGTGT ACAGCGTGCG CCAGGGGCTG CGCCTGTCAG GCGACTGGTA CGCCGCCAAC
CTGAAGTAG
 
Protein sequence
MTRYTALMQE LEAAPRTWLV TGVAGFIGSN LLETLLMHGQ KVVGLDNFAT GYQRNLDMVR 
EIVGADLWRN FRFKEGDIRN LEHCREVCEG VDHVLHQAAL GSVPRSIEDP ILANESNISG
FVNMMVAARD AKVKTFVYAA SSSTYGDEPT LPKVEDKIGK PLSPYAVTKY VNELYADVFA
TCYGMKAIGL RYFNVFGKRQ DPFGAYAAVI PQWFASLLRG ETVFINGDGE TSRDFCYIDN
CVQANLLAAT ATDEAALNTV YNVAFGERTD LNQLFDLIRE EVSRHKPEAA TAKPEHREFR
FGDVRHSLAD ISRAHTRLGY EPVYSVRQGL RLSGDWYAAN LK