Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2156 |
Symbol | |
ID | 7174078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2687153 |
End bp | 2690473 |
Gene Length | 3321 bp |
Protein Length | 1106 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643540676 |
Product | ABC transporter related |
Protein accession | YP_002436567 |
Protein GI | 218887246 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCC CCTCGCCCGT GTTTGCCGCA CGCGGGCTGT GCCGAACCTT TCCCGCGCCG GGGGCCGGGG GAGCGGTCGT CCGCGCCGTG GACGACGTGA CCCTGGATCT CGCGCCCGGC ACCATCAACG GCCTGCTGGG GCCGGACGGC GCGGGCAAGA CCACCCTGCT GCGCCTGGCC GCCGGGCTGC TGCTGCCCGA CGCGGGCAGC CTGACCGTGC TGGGCCGCGA CACGGTGACG CAGGCGCAGG CCGTGCAGTC GGCCATCGGA TACATGCCCC AGCGCTTCGG CCTGTACGAA GACCTTTCCG TGGCCGAAAA CCTTTCCCTG TACGCCGACC TGCACGGGGT ATCCGCCGCG CAGAAGGCCG AACGCTGGCC CGCGCTGATG CGCATGACCG GCCTTGCCCC GTTTCTCGAC CGGCTGGCCG GGCGGCTTTC CGGCGGCATG AAGCAGAAGC TGGGGCTGGC CTGCACCCTG GTGCGCTCGC CCCGCCTGCT GCTGCTGGAC GAGCCCACCG TGGGCGTGGA CCCGCTGTCG CGGCGCGAGC TGTGGAACAT CGTGTTCTCG CTGGTGCGCG AGCACGGCAT CACCGTGCTG GTCAGCACCG CCTACCTGGA CGAGGCGGAA CACTGCGACC GGGTGGCCAT CATGCACCAC GGGCGGCTGG TGGGCGACGG CGCGCCCGGC CACTTCACCC GCCCGCTCAC GGGCCGGACG TGGTTCGTCA CCCCCGCCAT GCGCGCCCGC GCGGCCCAGA CCATGCTGCC CGCGGCCCCC GGCGTGACCG ATGCCGTGCT GCACGCGGGC GGGGTGCGCC TGCTGACGGA AACCCCGGAG GCGGCGCGGG CGCTGGTTGC GTGCGGGCTG CTGACGGAGG GGGAATCCGC GCCGGGCACC GTGGGGCAGT TGCACCCTCG CGCACCCGGC TTCGAGGACG GCTTTCTGGC CCTGTTCGCC GCCCTGCCGC AAGAGGCGGG CACGGGCGAC AGGCCCGCGC CGGGGCGGGA CTCCATGCCC GCCGCCCCCC CTGCCCCATA CGCATCTGCA ACAGACACAC CTGCTCCGGA CGCACCGGAT TGCCCCTCGC AGGGCCAACC ATCCGCACTG GCTCCCGAGC CTCCGAACAG TCACCCGGAC AGCACGCCGG TCATCGAGGT GCGCGGCCTC GAACGCCGCT TCGGCACGTT CATGGCCGTG AAGGGGGCCA GCTTCGACGT GCGGCGCGGC GAAATCTTCG GTTTGCTGGG CCCCAACGGC GCGGGCAAAT CCACCATCTT CCGGATGCTC TGCGGCCTGC TGCCGCCCAC CGGCGGCAGC CTGCGCGTGG CCGGGGTGGA CCTGCGCCGC GCACCCGCCG CCGCCCGCCG CCGGGTGGGC TACGTGGCCC AGAAGTTTTC GCTGTACGGA CAGCTTTCCG TGCTGGAAAA CCTGCGTTTC TTCGCCAGCG CCTACGGCCT GTACGGAGCC GCGCGCGATG CGCGCATGGC CTGGGCCCTG CGCGACTTCG ACCTGGCCGA CGTGGCCGAC GCCCAGAGCG GCGACCTTTC GCTGGGCTAC CGCCAGCGGC TGGCCATGGC CTGCGCCCTG ATGCACGAGC CGGACATCCT GTTCCTGGAC GAGGCCACCT CGGGCGTGGA CCCGCTGGCC CGGCGCGAAT TCTGGCGGCG CATCACCGCG CTGGCGGAGT CGGGCGTCAC GGTCATCGTC ACCACCCACT TCCTGGACGA GGCGGAATAC TGCGACCGCA TGGCCATTCT GGTGGGCGGC GAGGTGCTGG CCCTGGGCAC CCCGGCGGAA ATCCGCGCCC TGGCGCCAGC GGCGGACGAC GCAACGGACG GCCCGCGCGA AGCTGCGCGA AGGGACGACG GCCAGCGGGA TGCGCCGGGG CACGCCTCCG GCCAGGCCAC CATAGAGCGG GCCTTCATCG CGCTGGCGGA ACGGCACAGG GCCAAGGCGC CCGGCGCGAC TGGCGTGACC GGCGTGACAG GGGCGACTGG CATGACTGGC GTGGCCGGCG CGCCCGGTCA GACCGCGCCG TCTTCCGGGC CCGGCATGCG CCCCCTCTCC GGCACCCCGG ACTCCGCTCA TCCCGCCCCC GCCGGACAAG CGCAGGACAT CCGCCCCACC GCCCTGCGCG GCCTGCTGCT GCGCATGCGC GGACTGCTGC GCAAGGAATG GCTGCAAGTG GTGCGCGACC CCAGCGCCAT CGCCATCGCG CTGGTCATGC CGGTGGTGCT GCTGTTCCTG TTCGGCTACG GCATCAGCCT GGACGCCCGC GACGTGCCCG TGGCCATCGT GACCGACGAT CTGGGACCGG AGGCCATGGA ATTCGCCGCG CGCCTGCTGC TGGCCGACAC CTTCCGCCCC CGCGTGGTCA CCGACATGCG CCGGGCGGAA GAAGACCTGC GCGCCGGGCG GGTGGACGCC ATCGTGCACC TGCAATCCGA CTTTGCCCGC CGCCTGTCCG ATGCCACCGG TGGCGCCACC GGCGGGGCGG CAGGCGGCAC GGCACGCCCC GACGGCGCGC CCCCGGCAGG CGATGCGGGC ACCGTGCCTG TGCAGCTCAT CGTCAACGGG GTGGATCCCA ACAACGCCCG CACCGTGTCC GGCTACGTCA CCAGCGTGTG GCAAAGCTGG CTGTCCGGTC GTGTCGCCGC GGCCGGGCAG GTTCCGGCGG TGCGGATGGC CACGCGCATG TGGTTCAACC CCACTGCCGA CAGCCGCCAC TTTCTGGTGC CGGGGCTGAT GGTGCTGATC ATGACCCTGA CCGGCGCCCT GCTGACCGCC ATGGTCATGG CCCGCGAATG GGAGCGCGGC ACCATGGAGG CCCTGCTGGT GACCCCGGTG CGCATGGGCG AACTGCTCAC CGGCAAGCTG CTGCCCTATT TCGTGCTGGG CATGGGGGGC ATGGTGCTGA CCGTGATCAT GGCCCTGTAC CTGTTCGGGG TGCCCCTGCG CGGTTCGCTG GCGGTGCTGG CCGGGGCCTC GTCGCTTTTC CTCACCGCCG CGCTGGGCAT GGGGCTGTTC ATCTCGGTGC TGGCGCGCAA CCAGTTCATC GCCGGTCAGG CCGCGCTGCT GGCCACCTTT CTGCCCGCTC TGTTCCTGTC GGGGTTCATC TTCGACCTGG AAAGCACGCC CGGCTTCGTG CAGGCGGTGT CGTACGTCAT TGCGGCGCGC TACTTCGCCA CCCTGCTGAA GACCATATTT CTGGCGGGCG AGGTATGGGA GGTCATCGTG CCCAACGCGC TGGCCCTGGC CGCGCTGGCG TTCTTTTTCC TGACCGTGGC GAGGCTGCGG TGCCGCAAAC GGCTGGACTA G
|
Protein sequence | MTAPSPVFAA RGLCRTFPAP GAGGAVVRAV DDVTLDLAPG TINGLLGPDG AGKTTLLRLA AGLLLPDAGS LTVLGRDTVT QAQAVQSAIG YMPQRFGLYE DLSVAENLSL YADLHGVSAA QKAERWPALM RMTGLAPFLD RLAGRLSGGM KQKLGLACTL VRSPRLLLLD EPTVGVDPLS RRELWNIVFS LVREHGITVL VSTAYLDEAE HCDRVAIMHH GRLVGDGAPG HFTRPLTGRT WFVTPAMRAR AAQTMLPAAP GVTDAVLHAG GVRLLTETPE AARALVACGL LTEGESAPGT VGQLHPRAPG FEDGFLALFA ALPQEAGTGD RPAPGRDSMP AAPPAPYASA TDTPAPDAPD CPSQGQPSAL APEPPNSHPD STPVIEVRGL ERRFGTFMAV KGASFDVRRG EIFGLLGPNG AGKSTIFRML CGLLPPTGGS LRVAGVDLRR APAAARRRVG YVAQKFSLYG QLSVLENLRF FASAYGLYGA ARDARMAWAL RDFDLADVAD AQSGDLSLGY RQRLAMACAL MHEPDILFLD EATSGVDPLA RREFWRRITA LAESGVTVIV TTHFLDEAEY CDRMAILVGG EVLALGTPAE IRALAPAADD ATDGPREAAR RDDGQRDAPG HASGQATIER AFIALAERHR AKAPGATGVT GVTGATGMTG VAGAPGQTAP SSGPGMRPLS GTPDSAHPAP AGQAQDIRPT ALRGLLLRMR GLLRKEWLQV VRDPSAIAIA LVMPVVLLFL FGYGISLDAR DVPVAIVTDD LGPEAMEFAA RLLLADTFRP RVVTDMRRAE EDLRAGRVDA IVHLQSDFAR RLSDATGGAT GGAAGGTARP DGAPPAGDAG TVPVQLIVNG VDPNNARTVS GYVTSVWQSW LSGRVAAAGQ VPAVRMATRM WFNPTADSRH FLVPGLMVLI MTLTGALLTA MVMAREWERG TMEALLVTPV RMGELLTGKL LPYFVLGMGG MVLTVIMALY LFGVPLRGSL AVLAGASSLF LTAALGMGLF ISVLARNQFI AGQAALLATF LPALFLSGFI FDLESTPGFV QAVSYVIAAR YFATLLKTIF LAGEVWEVIV PNALALAALA FFFLTVARLR CRKRLD
|
| |