Gene DvMF_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2117 
Symbol 
ID7174037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2636166 
End bp2636789 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID643540635 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002436528 
Protein GI218887207 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATA AGTACGATGA CATTGACGAG TACATCGCCG ACCTGCGGGC CGAAATAGAA 
AAAAGCGAGA ACTGCGCCAA CCATCACTAC AACCTTGGCG TGGCCCTGCT GCACAAGCGC 
GACTTCGTGG CGGCTGAAGA GTCGTTCCTG AGCGCCGTGC GCAACTCGCC CCGCCTGGGC 
GAAGCCTATG TGCAGCTGGG CGGCATCTGC CTGCAGCGCG GCGACCTGGA CGGCTGCCTG 
CGCTACAACG AGGAAGCGGC CCAGTGCCGT GCCAAGTTCC CGGTGCCGTG GAGCAACATC 
GGCTTCGTGC ACCTGCAACG CGGCGAGCCG GAAGAAGCCA TCAAGGCCCT GAAAAAGGCC 
CTGAAGTGGG ACCCGGACTT CATCCAGGCC ATGGCCACCA TGGGCGCCGC CTACTTCATG 
CAGGGCGACT ACGAGGCCTC CATCCAGATC AGCCGCGAGG CCATCAAGCG CGAACCCGGC 
TTTGGCCCGG CCTACAACAA CCTGGCGCTG GCCCACTTCG AGCGGGGCGA ATTCGCCCAG 
GCCGTGCAGT TCGCCGACCA GGCCGCTGCC TGCGGTTTCG AGGTGCGTCC GGAGTTCCTG 
AAGGATCTGG AAGCCCACCG CTAG
 
Protein sequence
MKDKYDDIDE YIADLRAEIE KSENCANHHY NLGVALLHKR DFVAAEESFL SAVRNSPRLG 
EAYVQLGGIC LQRGDLDGCL RYNEEAAQCR AKFPVPWSNI GFVHLQRGEP EEAIKALKKA 
LKWDPDFIQA MATMGAAYFM QGDYEASIQI SREAIKREPG FGPAYNNLAL AHFERGEFAQ 
AVQFADQAAA CGFEVRPEFL KDLEAHR