| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2024 |
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| Symbol | |
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| ID | 7173943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2506764 |
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| End bp | 2507945 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643540541 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002436435 |
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| Protein GI | 218887114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC CGCTCGTGGT CACCGCCGCA GAGGCCGGAC AGAAGCTGGT GCAGTACCTG
CAACGGCGCT GCGGCGCGCC GCAGTCGGCC ATCCAGCGCT GGGTGCGCAC CGGGCAGGTG
CGCATCAACG GGGGGCGCTG CAAGCCCTTT GACCGCGTGG CCGAGGGCGA CGTGGTGCGG
GTGCCGCCTT TTGCCCTGGC GGGCGGAGAG GGGGACCCGG TTGTCGGGGG GGGTGCGCCG
GATGCAGGGC AGGGTGCAAC GCGGGCTGCG TCGGCGAATG CGGGCGGAGG AAAAGAGCGG
GGCTCCGCCC CGCGCCCCGC AAGGGGACCG TATCCCCTTG ACCCCGAACC GGGTGAGGGT
GCGGCCTGTG GTACGGCAGC AGCGGGAAGC ACGGCGGCAC CAGGTCCACG GGCATGCGGC
ACACGCCCGG AATTTCAGGC ATCACCCTTG TCCGTGGCGG GCCGCGCCGA AGGGCTGCTG
GTGCTGCTGA AGCCCGCCGG GCTGGCGGTG CAGCCGGGCA CCGGCCACGA TGATTGCGTT
ACCGCCCGGC TTGCGGCGCA GTACGCCGGG GCGGACTTTC TGCCCACGCC CGCGCACCGG
CTGGACCGCG ACACCTCGGG CCTGCTGCTG GTGGCCACCA GTTATGCCCG GCTGCGGGCG
CTGTCCGACG CCTTTGCGGC GCGCGAAGGG CTGGTGAAGG AATACCTGGC CTGGGTGGCG
GGACGCTGGC CCCACGAGGG CGCGCGGACC CTGCATGACC GGCTGGAGAA GCAGGGCGCT
CCGGGCCGCC AGAAGGTGCG CCGGGTGGGC GGGGAGGGTT CCGTTCCTCG CGCGGCGTCT
GGCAATGAAG CGGTTCGCGT GGAGTCTGGT ACGGACGCGG CCCATGCCGC CGCCGGTGCT
GACGCTGGCC GCCACGCCGC CTGCACCGTC ACCCCCCTGC GGCGCGGCGA TGGGGCGTCC
CTGCTGCTGG TGCGCCTGCA CACCGGGCGC ACCCACCAGA TCCGGGTGCA GCTTGCGGAG
CGGGGACACC CCATCATGGG CGACCGCAAG TACGGTGGGC CCGCCTGTGG TCAGGGCATG
CTGCTGCACG CCGTACGCCT GACCCTGCCC GACGGCGAAC GCTTCACGGC CCTGCCGGAC
TGGACGGGCC GCTGGCAGGT GGGCGAGGGC GATCTGCCCT AG
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| Protein sequence | MAEPLVVTAA EAGQKLVQYL QRRCGAPQSA IQRWVRTGQV RINGGRCKPF DRVAEGDVVR
VPPFALAGGE GDPVVGGGAP DAGQGATRAA SANAGGGKER GSAPRPARGP YPLDPEPGEG
AACGTAAAGS TAAPGPRACG TRPEFQASPL SVAGRAEGLL VLLKPAGLAV QPGTGHDDCV
TARLAAQYAG ADFLPTPAHR LDRDTSGLLL VATSYARLRA LSDAFAAREG LVKEYLAWVA
GRWPHEGART LHDRLEKQGA PGRQKVRRVG GEGSVPRAAS GNEAVRVESG TDAAHAAAGA
DAGRHAACTV TPLRRGDGAS LLLVRLHTGR THQIRVQLAE RGHPIMGDRK YGGPACGQGM
LLHAVRLTLP DGERFTALPD WTGRWQVGEG DLP
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