| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2019 |
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| Symbol | |
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| ID | 7173938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2500863 |
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| End bp | 2501918 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540536 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_002436430 |
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| Protein GI | 218887109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCGCATCCGC CGCCCCCCAC CTTTCCCTGG CCCCGCCCCT GCGGACCGAC
GCCCCGTGGC TGGCCCCCCT GGCCGGGTAT TCCGACCTGC CCTTCCGCCT GCTGTGCCGC
GAGCACGGCG CGGCGGCCTG CTGCACAGAA ATGGTCAGCG CCAAGGGGTT GCTGTACCAC
AGCCCCGGCA CCCGCGACCT GCTGGCCTCC ACGCCTGAAG ACGCGCCACT TGTCCTGCAA
CTGTTCGGAG CCGACGCGGA CATCATGCGC ACGGTCATGC CGGGGCTGCT GGAGCAGGGC
TTTCGCTGGT TCGACCTGAA CATGGGATGT TCGGTGCCCA AGGTGGTCAA GACGGGTTGC
GGCTCGGCCA TGTCGCGCGA CATGGACAAC GCCCTGTCCG TTGCCCGCGC CATGGTGGAG
GTGGCCGGTG AAGGCCGGGT GGGCTTCAAG ATGCGGCTGG GCTGGCAGGC GGGCGAGGAA
ACCTGGCGCG AAATGGCCCT GCGGCTGCAA GACGCGGGCG CGGGGTGGAT CACCCTGCAC
CCCCGCTTCG CGCGGCAGGG CTTTGGCGGC GAAGCGCGCT GGAGTGCCCT GCGCGAGCTT
GCGGCCACGC TGACCATCCC GGTCATTGCC AGCGGCGACC TGTTCACGGC GGCGGACGCG
GTGCGCTGCG TGCGCGAGAC GGGCGTGGCC ACGGTGATGT TCGCGCGCGG GGCCATGAAC
AACCCCGCCG TCTTCGACGA ATACCGGGTG CTGCTGGCCG GGGGCCAGCC CCCGCCGCCC
GACGCGGACC GGCTGAAGGC GCTCATCCGC CGCCATCTTG AACTGGCCCT GGCCCACTCC
GGCGAACGCA CCGCCCTGCT CAAGATGCGC ACCTTCGTGC CGCGCTACGT GCGCCACATT
CCCGGCGTGC GGGCGCTGCG CAACCGGCTG GCCTCGTGCC TGGACCGCGA CCTGCTGGAA
GAACTGCTTG AAACCCACCT GACCCCGCAA GCGTTCGCGG AAGACGGCGG CGCCGACCAA
GCCACCACCA ACACCGATGG AGAGGCCCGG CCATGA
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| Protein sequence | MTDTASAAPH LSLAPPLRTD APWLAPLAGY SDLPFRLLCR EHGAAACCTE MVSAKGLLYH
SPGTRDLLAS TPEDAPLVLQ LFGADADIMR TVMPGLLEQG FRWFDLNMGC SVPKVVKTGC
GSAMSRDMDN ALSVARAMVE VAGEGRVGFK MRLGWQAGEE TWREMALRLQ DAGAGWITLH
PRFARQGFGG EARWSALREL AATLTIPVIA SGDLFTAADA VRCVRETGVA TVMFARGAMN
NPAVFDEYRV LLAGGQPPPP DADRLKALIR RHLELALAHS GERTALLKMR TFVPRYVRHI
PGVRALRNRL ASCLDRDLLE ELLETHLTPQ AFAEDGGADQ ATTNTDGEAR P
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