| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1987 |
|---|
| Symbol | |
|---|
| ID | 7173906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2459260 |
|---|
| End bp | 2462016 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643540504 |
|---|
| Product | Pyruvate, water dikinase |
|---|
| Protein accession | YP_002436398 |
|---|
| Protein GI | 218887077 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGCT TTTTCCACAC ACTCGGCGCG CTGTTCCGGC GGCAGGACGC ACCTGCGCAG
GACGGCGGCG TGCCCGACGC CGAAACCGAA CGGCTGCGGG CGCTGTACCG CGAACGCTGT
TCGCGGTTCC GGCTGCTGCT GTCCGCCAAC AAGAGCGCCC TCGAGATCAT GGCCGACATG
GAAGAGGCCC TGCGCGGGGT GCGCCCCTTC GGCATGACCT ACGTGCGCGG GGCCTGCACC
CGCGCGTGCG CCAGCGTGTT CCAGATCGTG CGCCACCTCA ACGCGCTGTC CGATGACCGC
TGGCCCGAAC TGGAAACCAG GTTCAACGAG ATACGCGCGG CCATCGAGGC CGTGGTGGCC
CCCCACGTGC GCGCTGGCGG CGGGCCGCTG GTGCTGCCCA TTGCCGAAAC CGGCGTGGAC
ATGGCCGACC AGACCGGCGG CAAGATGGCC AACCTGGGCG AAATCCGCCG CCGCCTCGGC
ATCACCGTGC CCGACGGCTT CGTGGTCACG GCCACGGGCT ATCAGCGCTT CATGGAGGCG
GGCGGGCTGC AGGAAGAGAT CGACCGGCGG GTGCAGGCGG CGGACGCCAC CCGGCTGGAC
GAGGTGTTCG CGCTGTCCGC GTCCATCCAG CAGCTCATTC TGGCCGCGCC CGTTCCCGAC
GACCTGGCCG GGGCCATCAC CGCGCAGGTG GAGCGCCTGG CCGGGCCCCC GCAGGATGCG
CGAACGGGGC CGCATCCCGG AATCAACGCC TGTTCCGGCG CCGAGGTGCG CTTTGCCGTG
CGCTCCAGCG CCGTGGGCGA GGATTCGCTG GATGCCTCCT TTGCTGGGCA GTACCGCTCG
GAACTCAACG TGCCGCCCGA AGACGTGCTG GACACCTTCA AGGACATCGT GGCCAGCAAG
TACGGCGTCA CCGCCATGAC CTACCGTCTG GCGCGCGGCA TCCCCGACGA GGACGTGCCC
ATGTGCGTGG GCTGCCTGGT CATGGTGGAC GCGGTGGCGG GCGGCGTTGC CTACAGCCGC
AACCCGCTGG ACCTGCGCGA CAACACCGTG GTCATCAACG CCGTGCCCGG CCTGCCCAAG
GCCGTGGTGG ACGGCAGCTT CAGCCCCGAC GTGTTTGTGG TCTCGCGCGA GGTGCCCATG
CAGGTGGCGC AGCGCCAGAT AGCCGCCAAG CCCCAGCGCT TCGTGCGCGA CCCCATCGAG
GGCGTGCGGC TGGAGGACAT GCCGTCGGAC ATGGTGGACG CCCCATGCAT CGACGACGCC
CGCGCCCTGG AAATAGCCTC GCTGGCCGCC GGGTTCGAGG TGTTCTACGG AGAACCGCAG
GACATCGAAT GGGCCGTGTG CCCCGAAGGC GTGCTGACCA TCCTGCAAAG CCGCCCCCTG
CGCGAGGCGC GCCACGACGA GCTTCCGGAG GGCGAATGCG CGCCCGTGGC CGGTGCCGAT
GGTGCGGACG CCACCGCAGC GGATGCCGCC GCCGAAACCG GCCCCCTGCC GGGCGGCTAC
AATTGCGGCG AATCCGGCCC GCCGGTGCTG CTGCTGGGCG GCACCCCGGT CAGCCCCGGG
GCGGGCGCGG GCCTGGCCCA CGTGGTGCGC AAGGACATGG ACCTGTTGTC CTTCCCCGAC
GGCGGCGTGC TGGTCATCGA GCGGGCGCTG CCGCGCTGGG CGCCGCTGCT GTCGCGCGCC
TCCGCCGTGG TGGCCGAGGC GGGCGGCGCC GCCGGGCATC TGGCCAGCGT GGCCCGCGAG
TACGGCGTGC CCGCCCTGTT CGGCTTGCCC CGCGCCGCCG AACTGCTGGA GCATGCGGGC
ATCGTCACCG TGGATGCCGA CAACCGCCGC GTGCACCCCG GCCGCATCGA AGACCTGTTG
GGCCATGCCC CGCGCCGCAA CCTTATGGAG GGCAGCCCCG TGCACACCGC GCTGGCAGAG
GCCGCGCGGC TGGTGCTGCC CCTGAACCTG CTGGACCCGG AGTCGCCCCG GTTCGCCCCC
GCCCATTGCC GCACCCTGCA CGACATCACC CGCTTCTGCC ACGAGAAGTC CGTGGAGGTG
CTGTTCGGCG TGGCCGATCA CATGGGCGCC ACCGGCCCCG GCACCCAGCG GCTGGGCAAG
CAGTTGCGGG TCAACGGCAC CAGGCTGCAA TACTGGCTGC TGGACATCGA CGGAGGCTTC
CGCAAGCCCG TGCCCGGTCC CGTGGTGGAC CTTGCCGACA TCGCCTCCGC GCCCATGCTG
GCCCTGTGGG ACGGCATGAC CGCCGTGCCC TGGGCCGGGC CGCCCGCCAC CGACGCGCGC
GGGTTCCTGT CCGTCATGAT GGAATCCACC GTGAACCCGG ACCTGGAGCC CACTGCGGCC
ACCACCCTGG CCAACCGCAA CTTTCTCATG ATCTCGCGCG ACTACTGCAA CCTTCAGGCG
CGCTTCGGCT ATCACTTCTG CACCGTGGAA GCCATGGCCA CCGACAACCC GCACGAGAAC
TACGTGACCT TCCAGTTCAA GGGCGGCGCC GCCAGCGCCG ACCGCCGCGC CCTGCGCGCC
CGCTTCGTGG GCGAAGTGCT GGAAGCGCGC GGCTTCCGCG CCGACGTCAA GGACGACGCC
CTGTTCGCCT CCCTCGAAGG TCTGCCCAAG GACCGCATCC TCACCCTGGT GCGCGGCGTG
GGCTACCTGC TCATCCATAC CCGGCAGATC GACATGGTGG CCCACAACGA ACGCGTGTTC
GGCCCCATCC GCGACCGCAT CGCCGCCGAC CTCGCCAGGA TCGCGCCTGT TACCTAG
|
|---|
| Protein sequence | MGGFFHTLGA LFRRQDAPAQ DGGVPDAETE RLRALYRERC SRFRLLLSAN KSALEIMADM
EEALRGVRPF GMTYVRGACT RACASVFQIV RHLNALSDDR WPELETRFNE IRAAIEAVVA
PHVRAGGGPL VLPIAETGVD MADQTGGKMA NLGEIRRRLG ITVPDGFVVT ATGYQRFMEA
GGLQEEIDRR VQAADATRLD EVFALSASIQ QLILAAPVPD DLAGAITAQV ERLAGPPQDA
RTGPHPGINA CSGAEVRFAV RSSAVGEDSL DASFAGQYRS ELNVPPEDVL DTFKDIVASK
YGVTAMTYRL ARGIPDEDVP MCVGCLVMVD AVAGGVAYSR NPLDLRDNTV VINAVPGLPK
AVVDGSFSPD VFVVSREVPM QVAQRQIAAK PQRFVRDPIE GVRLEDMPSD MVDAPCIDDA
RALEIASLAA GFEVFYGEPQ DIEWAVCPEG VLTILQSRPL REARHDELPE GECAPVAGAD
GADATAADAA AETGPLPGGY NCGESGPPVL LLGGTPVSPG AGAGLAHVVR KDMDLLSFPD
GGVLVIERAL PRWAPLLSRA SAVVAEAGGA AGHLASVARE YGVPALFGLP RAAELLEHAG
IVTVDADNRR VHPGRIEDLL GHAPRRNLME GSPVHTALAE AARLVLPLNL LDPESPRFAP
AHCRTLHDIT RFCHEKSVEV LFGVADHMGA TGPGTQRLGK QLRVNGTRLQ YWLLDIDGGF
RKPVPGPVVD LADIASAPML ALWDGMTAVP WAGPPATDAR GFLSVMMEST VNPDLEPTAA
TTLANRNFLM ISRDYCNLQA RFGYHFCTVE AMATDNPHEN YVTFQFKGGA ASADRRALRA
RFVGEVLEAR GFRADVKDDA LFASLEGLPK DRILTLVRGV GYLLIHTRQI DMVAHNERVF
GPIRDRIAAD LARIAPVT
|
|---|
| |