Gene DvMF_1972 details

Gene Information

• Locus tag: DvMF_1972
• ID: 7173891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 2438875
• End bp: 2439540
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643540489
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_002436383
• Protein GI: 218887062
• TIGRFAM ID: [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 91
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCTTTG GCGTCAGTCT TGCGGTCTGG GGAGAGTACG CCTGCTTCAC CAGGCCGGAG 
TTCAAGACCG AGCGTGTCAG CTATGACGTC ATCACGCCTT CGGCGGCGCG CGGGCTGCTG 
GAAGCGGTCT ACTGGAAACC CGCCATAGCG TGGATGGTGG ACCGCATCCG CGTGCTCAAC 
CCCATCCGGT TCGATTCGGT GCGGCGCAAC GAGGTGGGCT GCAAGATTCC CCTCGGGGCC 
GTCACTGCGG CCATGAAGGA TCCGGAACGG CCACTGGGCA TCCTTGTGGA AGACGAACGA 
CGGCAACGGG CCACCCTGCT GCTGCGCGAC GTGCGCTACG TCATCGACGC CCATTTCGAA 
GCCCGCGACG AAGATGGCCG CAATACCGCC AAGCACCGCG ACATCTTCCT GCGGCGCGCG 
GCCAGGGGGC AGTGCTTCCA CATGCCATAC CTCGGCTGCC GCGAATTCCC CGCCTCGTTT 
CAACTGGTGG AGGGCGATCC GCCCCACCCC CACGAATCCC TGCTGGAAGA GCGCGACCTT 
GGCTGGATGC TGCACGACCT GGACTACGGG CCGGACGGCG AGCGGCAGCC GCGCTTCTTC 
CGGGCCTGCA TGCAGGACGG CGTCATCGAG GTGCCGCCCC TGCGCTCTCT GGAGGTGCGG 
GCATGA 

 

Protein sequence

MSFGVSLAVW GEYACFTRPE FKTERVSYDV ITPSAARGLL EAVYWKPAIA WMVDRIRVLN 
PIRFDSVRRN EVGCKIPLGA VTAAMKDPER PLGILVEDER RQRATLLLRD VRYVIDAHFE 
ARDEDGRNTA KHRDIFLRRA ARGQCFHMPY LGCREFPASF QLVEGDPPHP HESLLEERDL 
GWMLHDLDYG PDGERQPRFF RACMQDGVIE VPPLRSLEVR A