Gene DvMF_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1938 
Symbol 
ID7173856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2391861 
End bp2392826 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content73% 
IMG OID643540454 
ProductDNA polymerase III, delta prime subunit, putative 
Protein accessionYP_002436349 
Protein GI218887028 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG ACACCACCAC TGCCCCCAAA CGCGGCCGCT CTGCCGCAGC CGCAACGGAT 
GCCCCGCCCG CGCCGCAGGA CCCGCGCGAG GTTGTGGCCC CGCTGCTGGA CCCCCGGCAC
CGGCGCACCG TGGGCCATCT GCACGCGCTG GCCGCATCGC CGCCGCAGGT GGTGCTGGCA
GAGGGCGGCA CCGCGCCGGA GCGCATGGCC CTGGCCCTGT ACTGGGCGGC GCTGCTGAAC
TGCGAGGCCC CGGATGATAC CCCGGACGAT GCCCGTCCCT GCCTGACCTG TCCGTCGTGC
CTGCGCATGG CCGGGGGCGG CCACCGCGAC CTCGTGGTGC TGGACGGCAA CAAGCCCAGC
GCCGAGGAAG GTTCCTTTTC CATAGAGAAC GTGCGCGCAC TGCGCGGCCT TTTGGGCGAA
CCCCCGCGCG AGGGCCGCAG GCGCGTGGTG GTGCTGGTGG ATGCCCACAC CCGCGTGGAG
GCGGCCAACG GCCTGCTGAA GTCGCTGGAA GAACCCCGCC CCACCACCTG CTTCGTGCTG
CTGGCCCCCC AGCGCGAACG GCTGCTGCCC ACGCTGGTGT CGCGCAGCTT CGTGCTCACT
CTGGCCTGGC CCACCGATGC GGCCCCGCCG TCCCCGGCGG TGCGCGACTG GCTGGACGCG
CTGGTGGAAT TCATCCAGAC CGGCGGCGGC TGGATGGAGC GCACCTCCCG CAAGGGCGAT
CTGGACGCCC CCCTTGCCGC CGCCGTGGTG CTGCATTGCC AGCGCACCCT TGCCGACGTG
CTGGCCGGGC GCGCCGCAGA CCCCCTGGGC CGCCTGCTGG CAGAACGCAT GGACCTGGCC
CGCCTGCGCC GTTGCGACGA GGCCCTGGCC GCAGCGCAGG AGGCCCTGTC CCTGAGCCCC
AGCCCGGTGA ATCCGGCCCT GGTCATGGAC TGGCTGGCCA CCCGGATGTT CCTGGGCGTG
CGCTAG
 
Protein sequence
MANDTTTAPK RGRSAAAATD APPAPQDPRE VVAPLLDPRH RRTVGHLHAL AASPPQVVLA 
EGGTAPERMA LALYWAALLN CEAPDDTPDD ARPCLTCPSC LRMAGGGHRD LVVLDGNKPS
AEEGSFSIEN VRALRGLLGE PPREGRRRVV VLVDAHTRVE AANGLLKSLE EPRPTTCFVL
LAPQRERLLP TLVSRSFVLT LAWPTDAAPP SPAVRDWLDA LVEFIQTGGG WMERTSRKGD
LDAPLAAAVV LHCQRTLADV LAGRAADPLG RLLAERMDLA RLRRCDEALA AAQEALSLSP
SPVNPALVMD WLATRMFLGV R