Gene DvMF_1917 details

Gene Information

• Locus tag: DvMF_1917
• ID: 7173835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 2362328
• End bp: 2364280
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643540433
• Product: heavy metal translocating P-type ATPase
• Protein accession: YP_002436328
• Protein GI: 218887007
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2217] Cation transport ATPase
• TIGRFAM ID: [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC; [TIGR01525] heavy metal translocating P-type ATPase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 95
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCGGAC GCTTCGCCTG CCCCGGCTCC TACCGCGAAC TGATTTCTTC CCGAGAAACC 
CTGCTCTGCC TGCTGGGCGG CGTGCTGGCC GCCGTCTCAT GGGTCGCATC GCTTTCCGGC 
GCGCCCGCGT GGCTGGCCGC CGCGCTGGCC CTGACCGGGG CCGCCATCAA CGGCCTGCCC 
ATCGTCAAGG GCGCGGTGGA AGGCCTGATG GAAAAGCAGG TCAACGTGGA CGAACTGGTG 
TCCATCGCCC TCATCGCCTC GGTGGCGCAG GGCGAATACC TGTCCGCCGC CATCGTGGCC 
TGCATCATGA AGGCCGGTTC TCTGGTGGAA GGCTTCCTGA GCGATGCGGC CCGGCGATCC 
ATCAAGGCAC TGGCCTCCGT CACGCCGGAC ACCGCCACCA TCATCGTGCC GGGTGGCCGC 
GAGCGCACCG TGCCCGCCTC AGAAGTGCGC GTGGGCCAGC AGTTGCGCGT GCGCCCCGGC 
GAACGCATTC CCGTTGACGC GGTGATCCTG TCCGGCATCA CCGCCGTGGA CGAATCCTCC 
ATCACCGGCG AACCGCTGCC CCGCTCGTGC ACCACGGACG ACAAGGTGCT GGCGGGCACC 
ATGAACTACA ACGGCGTCAT CGTGGTCGAG GCGCAGCGCG TGGGCGAGGA CACCACCATC 
GGCAAGGTGG TGCGCCTGGT GGAAGAGGCG GAAGCCCACA ATCCCAGGGC GGCCCGCCTG 
GTGGACAAGT ACGCCCAGTG GTTCACCCCG GTGGTGCTGG CCTGCGCTGC CGCGGCATGG 
GCCGTTTCCG GCGAATCGTC GCGCGCGGTG GCCGTGCTCA TCGCCGGGTG CCCCTGCGCC 
CTGCTGATGG CCGCCCCCAC CGCCGCCGTC GCCGCTGTGG GCCGCGCCGC CCGCGCGGGC 
ATCATCGTGC GGGGCGGGCA GGCACTGGAA AAGGTGGCCG CCGCCACTCT GGTGCTGTTC 
GACAAGACCG GCACCCTCAC CTACGGACGC CCCGAACTGG ACGAAGTGCT GCCCGTGCCC 
GGCATGACCG AAGAACGGCT GCTGGCCTTG GCCGCCGGGG CGGAAGGCGG CGGCACCCAC 
CCCATCGCGC GGGCCATCGT GGCCGGCGCC CAGGCGCGGT CCGTCGCACC CGCCGCTGCC 
GAGGGCGCGT TCACCGAGGT GGGCGTGGGC GTGCGGGCCA CCGTGGACGG CCACGCCGTG 
GAGGTCTGCG GCGTTACTGC CGAGGTGGAG GCGGAACTTT CCCAACGCGC GCCCGGCCTG 
GCGCAGCCGC TGGCAGCCCT GCGCTCGCGC GGGGCCACCG CCCTGCTGGT GCGCGTGGAC 
ACGGCCCCCG CCGGGCTGCT GGCCGTCACC GATACCCTGC GGTCCGGCGC GCGCGCCTCG 
GTCAGCGGGT TGCGCGCCGC CGGTCTTGCC CACGCGGGCA TGCTGTCCGG CGACCATGAA 
ACCGCCGCCG CGCGCATCGC GGCAGAGGCC GGCATGGACT ACTGGCGCGC CGGGCTGAAG 
CCCGCCGACA AGCTGGCGTC CATCCGCACC CAGCAGCAGT CCGGGGCCAC GGTGATCTTC 
GTGGGCGACG GCATCAACGA CGCCCCCGCC CTGGCCGGGG CCGACGTGGG CGTGGCCATG 
GGCGGCGCGG GCACCGACGT GGCGCTGGAA ACCGCCGACG TGGCCCTTAC CCACGACGAC 
ATCGGCCGCC TGCCCTTTCT GGTGCGCCTT TCGCGCCGGG CCATCTCGCT CATCAAGATC 
AACATCGGCC TCGGCGTGCT GTTCAACGCG CTGTCCATCC TGGGCAGCGG CTACGGCCTG 
CTCTCGCCGG TGATGGCCTC CGTGTTCCAC AACGTGGGGT CGGTGATCGT GGTCATTTCG 
TCCGCCAGCC TGGCCTTCTT CGACGACGGC GAGCCGGGCC AGCCCGCCTG CCCCGCGCCC 
GCCGTCCCCG CCGCCGGGGG CAAGGCGGTG TAG 

 

Protein sequence

MIGRFACPGS YRELISSRET LLCLLGGVLA AVSWVASLSG APAWLAAALA LTGAAINGLP 
IVKGAVEGLM EKQVNVDELV SIALIASVAQ GEYLSAAIVA CIMKAGSLVE GFLSDAARRS 
IKALASVTPD TATIIVPGGR ERTVPASEVR VGQQLRVRPG ERIPVDAVIL SGITAVDESS 
ITGEPLPRSC TTDDKVLAGT MNYNGVIVVE AQRVGEDTTI GKVVRLVEEA EAHNPRAARL 
VDKYAQWFTP VVLACAAAAW AVSGESSRAV AVLIAGCPCA LLMAAPTAAV AAVGRAARAG 
IIVRGGQALE KVAAATLVLF DKTGTLTYGR PELDEVLPVP GMTEERLLAL AAGAEGGGTH 
PIARAIVAGA QARSVAPAAA EGAFTEVGVG VRATVDGHAV EVCGVTAEVE AELSQRAPGL 
AQPLAALRSR GATALLVRVD TAPAGLLAVT DTLRSGARAS VSGLRAAGLA HAGMLSGDHE 
TAAARIAAEA GMDYWRAGLK PADKLASIRT QQQSGATVIF VGDGINDAPA LAGADVGVAM 
GGAGTDVALE TADVALTHDD IGRLPFLVRL SRRAISLIKI NIGLGVLFNA LSILGSGYGL 
LSPVMASVFH NVGSVIVVIS SASLAFFDDG EPGQPACPAP AVPAAGGKAV